Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSN3P07498 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CSN3P07498 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSN3P07498 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.77■□□□□ 0.6
CSN3P07498 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSN3P07498 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CSN3P07498 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CSN3P07498 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CSN3P07498 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CSN3P07498 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CSN3P07498 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSN3P07498 ABHD17AP5-201ENST00000580133 923 ntBASIC18.76■□□□□ 0.59
CSN3P07498 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSN3P07498 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CSN3P07498 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSN3P07498 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSN3P07498 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSN3P07498 SMPD5-203ENST00000639008 1464 ntBASIC18.75■□□□□ 0.59
CSN3P07498 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
CSN3P07498 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSN3P07498 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.74■□□□□ 0.59
CSN3P07498 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.74■□□□□ 0.59
CSN3P07498 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSN3P07498 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSN3P07498 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
CSN3P07498 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.74■□□□□ 0.59
CSN3P07498 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CSN3P07498 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSN3P07498 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.73■□□□□ 0.59
CSN3P07498 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.73■□□□□ 0.59
CSN3P07498 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.73■□□□□ 0.59
CSN3P07498 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSN3P07498 AC025884.2-201ENST00000553429 711 ntBASIC18.73■□□□□ 0.59
CSN3P07498 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.73■□□□□ 0.59
CSN3P07498 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.73■□□□□ 0.59
CSN3P07498 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.73■□□□□ 0.59
CSN3P07498 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CSN3P07498 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CSN3P07498 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.72■□□□□ 0.59
CSN3P07498 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSN3P07498 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.72■□□□□ 0.59
CSN3P07498 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSN3P07498 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.72■□□□□ 0.59
CSN3P07498 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CSN3P07498 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSN3P07498 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSN3P07498 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSN3P07498 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CSN3P07498 AL359504.2-201ENST00000605506 1601 ntBASIC18.71■□□□□ 0.59
CSN3P07498 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CSN3P07498 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.71■□□□□ 0.59
CSN3P07498 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CSN3P07498 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CSN3P07498 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.71■□□□□ 0.59
CSN3P07498 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CSN3P07498 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CSN3P07498 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSN3P07498 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CSN3P07498 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.7■□□□□ 0.58
CSN3P07498 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CSN3P07498 AC007029.1-201ENST00000604183 313 ntBASIC18.7■□□□□ 0.58
CSN3P07498 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSN3P07498 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSN3P07498 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSN3P07498 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.69■□□□□ 0.58
CSN3P07498 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSN3P07498 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.68■□□□□ 0.58
CSN3P07498 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSN3P07498 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.67■□□□□ 0.58
CSN3P07498 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.67■□□□□ 0.58
CSN3P07498 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.67■□□□□ 0.58
CSN3P07498 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSN3P07498 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSN3P07498 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CSN3P07498 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.66■□□□□ 0.58
CSN3P07498 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.66■□□□□ 0.58
CSN3P07498 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSN3P07498 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.66■□□□□ 0.58
CSN3P07498 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSN3P07498 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSN3P07498 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSN3P07498 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSN3P07498 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CSN3P07498 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSN3P07498 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.65■□□□□ 0.58
CSN3P07498 MIR3960-201ENST00000583311 91 ntBASIC18.65■□□□□ 0.58
CSN3P07498 NTF6A-201ENST00000591175 560 ntBASIC18.65■□□□□ 0.58
CSN3P07498 U85056.1-201ENST00000616429 682 ntBASIC18.65■□□□□ 0.58
CSN3P07498 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSN3P07498 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CSN3P07498 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.65■□□□□ 0.58
CSN3P07498 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSN3P07498 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSN3P07498 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSN3P07498 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CSN3P07498 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.65■□□□□ 0.58
CSN3P07498 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSN3P07498 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CSN3P07498 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CSN3P07498 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms