Protein–RNA interactions for Protein: O75298

RTN2, Reticulon-2, humanhuman

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2O75298 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTN2O75298 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTN2O75298 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RTN2O75298 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.76■■□□□ 1.71
RTN2O75298 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.76■■□□□ 1.71
RTN2O75298 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
RTN2O75298 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.75■■□□□ 1.71
RTN2O75298 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTN2O75298 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RTN2O75298 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.75■■□□□ 1.71
RTN2O75298 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTN2O75298 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTN2O75298 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTN2O75298 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RTN2O75298 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RTN2O75298 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.74■■□□□ 1.71
RTN2O75298 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
RTN2O75298 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RTN2O75298 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.74■■□□□ 1.71
RTN2O75298 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RTN2O75298 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RTN2O75298 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.73■■□□□ 1.71
RTN2O75298 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
RTN2O75298 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
RTN2O75298 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.73■■□□□ 1.71
RTN2O75298 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.73■■□□□ 1.71
RTN2O75298 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RTN2O75298 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTN2O75298 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.72■■□□□ 1.71
RTN2O75298 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTN2O75298 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTN2O75298 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
RTN2O75298 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RTN2O75298 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.71■■□□□ 1.71
RTN2O75298 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
RTN2O75298 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.71■■□□□ 1.71
RTN2O75298 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.71■■□□□ 1.71
RTN2O75298 AC096887.2-201ENST00000623443 1957 ntBASIC25.7■■□□□ 1.7
RTN2O75298 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.7■■□□□ 1.7
RTN2O75298 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.7■■□□□ 1.7
RTN2O75298 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RTN2O75298 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
RTN2O75298 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RTN2O75298 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RTN2O75298 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RTN2O75298 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
RTN2O75298 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
RTN2O75298 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.68■■□□□ 1.7
RTN2O75298 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
RTN2O75298 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RTN2O75298 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.68■■□□□ 1.7
RTN2O75298 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
RTN2O75298 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
RTN2O75298 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RTN2O75298 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RTN2O75298 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RTN2O75298 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
RTN2O75298 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
RTN2O75298 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RTN2O75298 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RTN2O75298 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RTN2O75298 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.67■■□□□ 1.7
RTN2O75298 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.66■■□□□ 1.7
RTN2O75298 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.66■■□□□ 1.7
RTN2O75298 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.66■■□□□ 1.7
RTN2O75298 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RTN2O75298 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.66■■□□□ 1.7
RTN2O75298 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RTN2O75298 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
RTN2O75298 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
RTN2O75298 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.65■■□□□ 1.7
RTN2O75298 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RTN2O75298 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RTN2O75298 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RTN2O75298 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RTN2O75298 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RTN2O75298 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RTN2O75298 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.64■■□□□ 1.7
RTN2O75298 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RTN2O75298 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RTN2O75298 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.64■■□□□ 1.7
RTN2O75298 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
RTN2O75298 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.69
RTN2O75298 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RTN2O75298 AL157400.5-201ENST00000507624 621 ntBASIC25.63■■□□□ 1.69
RTN2O75298 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.63■■□□□ 1.69
RTN2O75298 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.63■■□□□ 1.69
RTN2O75298 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.63■■□□□ 1.69
RTN2O75298 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.63■■□□□ 1.69
RTN2O75298 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RTN2O75298 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
RTN2O75298 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.62■■□□□ 1.69
RTN2O75298 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.62■■□□□ 1.69
RTN2O75298 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RTN2O75298 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RTN2O75298 AC060814.1-201ENST00000554326 538 ntBASIC25.62■■□□□ 1.69
RTN2O75298 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RTN2O75298 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.62■■□□□ 1.69
RTN2O75298 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RTN2O75298 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms