Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.58
PDE6DO43924 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6DO43924 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6DO43924 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.7■□□□□ 0.58
PDE6DO43924 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.7■□□□□ 0.58
PDE6DO43924 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.7■□□□□ 0.58
PDE6DO43924 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC18.7■□□□□ 0.58
PDE6DO43924 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.7■□□□□ 0.58
PDE6DO43924 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.7■□□□□ 0.58
PDE6DO43924 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PDE6DO43924 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6DO43924 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PDE6DO43924 LINC01124-201ENST00000409786 2117 ntBASIC18.69■□□□□ 0.58
PDE6DO43924 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6DO43924 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE6DO43924 AC097639.1-201ENST00000565519 1891 ntBASIC18.69■□□□□ 0.58
PDE6DO43924 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6DO43924 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6DO43924 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.68■□□□□ 0.58
PDE6DO43924 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6DO43924 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PDE6DO43924 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6DO43924 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6DO43924 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
PDE6DO43924 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.68■□□□□ 0.58
PDE6DO43924 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE6DO43924 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.67■□□□□ 0.58
PDE6DO43924 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.67■□□□□ 0.58
PDE6DO43924 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6DO43924 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6DO43924 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PDE6DO43924 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6DO43924 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
PDE6DO43924 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6DO43924 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6DO43924 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PDE6DO43924 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6DO43924 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6DO43924 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDE6DO43924 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PDE6DO43924 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6DO43924 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6DO43924 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6DO43924 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6DO43924 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6DO43924 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6DO43924 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.65■□□□□ 0.58
PDE6DO43924 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6DO43924 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6DO43924 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.65■□□□□ 0.58
PDE6DO43924 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6DO43924 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.65■□□□□ 0.58
PDE6DO43924 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDE6DO43924 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
PDE6DO43924 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDE6DO43924 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDE6DO43924 AP003733.4-201ENST00000623785 1697 ntBASIC18.64■□□□□ 0.57
PDE6DO43924 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
PDE6DO43924 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PDE6DO43924 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6DO43924 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.63■□□□□ 0.57
PDE6DO43924 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6DO43924 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.63■□□□□ 0.57
PDE6DO43924 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6DO43924 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6DO43924 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6DO43924 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.63■□□□□ 0.57
PDE6DO43924 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6DO43924 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6DO43924 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6DO43924 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6DO43924 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6DO43924 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PDE6DO43924 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6DO43924 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.62■□□□□ 0.57
PDE6DO43924 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6DO43924 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6DO43924 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6DO43924 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6DO43924 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6DO43924 LINC00273-201ENST00000539813 1452 ntBASIC18.61■□□□□ 0.57
PDE6DO43924 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6DO43924 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PDE6DO43924 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6DO43924 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6DO43924 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.6■□□□□ 0.57
PDE6DO43924 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6DO43924 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6DO43924 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.6■□□□□ 0.57
PDE6DO43924 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6DO43924 AC096887.2-201ENST00000623443 1957 ntBASIC18.6■□□□□ 0.57
PDE6DO43924 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6DO43924 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6DO43924 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.59■□□□□ 0.57
PDE6DO43924 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6DO43924 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6DO43924 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6DO43924 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE6DO43924 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PDE6DO43924 DUSP8P5-201ENST00000422884 1815 ntBASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms