Protein–RNA interactions for Protein: O43448

KCNAB3, Voltage-gated potassium channel subunit beta-3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3O43448 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNAB3O43448 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNAB3O43448 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNAB3O43448 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.29■□□□□ 0.84
KCNAB3O43448 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNAB3O43448 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNAB3O43448 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNAB3O43448 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNAB3O43448 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNAB3O43448 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KCNAB3O43448 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KCNAB3O43448 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.28■□□□□ 0.84
KCNAB3O43448 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNAB3O43448 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
KCNAB3O43448 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KCNAB3O43448 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.27■□□□□ 0.84
KCNAB3O43448 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNAB3O43448 WHAMMP2-203ENST00000563942 1603 ntBASIC20.27■□□□□ 0.84
KCNAB3O43448 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNAB3O43448 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
KCNAB3O43448 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
KCNAB3O43448 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNAB3O43448 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNAB3O43448 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KCNAB3O43448 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KCNAB3O43448 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KCNAB3O43448 DUX4L13-201ENST00000554103 1267 ntBASIC20.27■□□□□ 0.84
KCNAB3O43448 DUX4L15-201ENST00000611059 1267 ntBASIC20.27■□□□□ 0.84
KCNAB3O43448 DUX4L23-201ENST00000615195 1269 ntBASIC20.27■□□□□ 0.84
KCNAB3O43448 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KCNAB3O43448 DUX4L24-201ENST00000617576 1269 ntBASIC20.27■□□□□ 0.84
KCNAB3O43448 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KCNAB3O43448 DUX4L22-201ENST00000618238 1269 ntBASIC20.27■□□□□ 0.84
KCNAB3O43448 DUX4L20-201ENST00000619712 1269 ntBASIC20.27■□□□□ 0.84
KCNAB3O43448 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNAB3O43448 DUX4L21-201ENST00000622058 1269 ntBASIC20.27■□□□□ 0.84
KCNAB3O43448 DUX4L10-201ENST00000622460 1267 ntBASIC20.27■□□□□ 0.84
KCNAB3O43448 DUX4L25-201ENST00000624915 1269 ntBASIC20.27■□□□□ 0.84
KCNAB3O43448 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNAB3O43448 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNAB3O43448 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
KCNAB3O43448 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNAB3O43448 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNAB3O43448 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
KCNAB3O43448 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KCNAB3O43448 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
KCNAB3O43448 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.26■□□□□ 0.83
KCNAB3O43448 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.26■□□□□ 0.83
KCNAB3O43448 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.26■□□□□ 0.83
KCNAB3O43448 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KCNAB3O43448 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.25■□□□□ 0.83
KCNAB3O43448 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.25■□□□□ 0.83
KCNAB3O43448 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNAB3O43448 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.25■□□□□ 0.83
KCNAB3O43448 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.25■□□□□ 0.83
KCNAB3O43448 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.25■□□□□ 0.83
KCNAB3O43448 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KCNAB3O43448 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNAB3O43448 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.24■□□□□ 0.83
KCNAB3O43448 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNAB3O43448 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNAB3O43448 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNAB3O43448 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.24■□□□□ 0.83
KCNAB3O43448 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.24■□□□□ 0.83
KCNAB3O43448 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.24■□□□□ 0.83
KCNAB3O43448 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KCNAB3O43448 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNAB3O43448 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
KCNAB3O43448 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KCNAB3O43448 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.23■□□□□ 0.83
KCNAB3O43448 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNAB3O43448 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
KCNAB3O43448 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNAB3O43448 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.23■□□□□ 0.83
KCNAB3O43448 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNAB3O43448 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNAB3O43448 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
KCNAB3O43448 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
KCNAB3O43448 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.22■□□□□ 0.83
KCNAB3O43448 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNAB3O43448 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
KCNAB3O43448 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNAB3O43448 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.22■□□□□ 0.83
KCNAB3O43448 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
KCNAB3O43448 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNAB3O43448 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNAB3O43448 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
KCNAB3O43448 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
KCNAB3O43448 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNAB3O43448 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNAB3O43448 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.21■□□□□ 0.83
KCNAB3O43448 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNAB3O43448 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNAB3O43448 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
KCNAB3O43448 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNAB3O43448 AP004609.3-201ENST00000610705 1884 ntBASIC20.2■□□□□ 0.82
KCNAB3O43448 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNAB3O43448 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNAB3O43448 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNAB3O43448 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms