Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SIRPB1O00241 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIRPB1O00241 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.38■□□□□ 0.85
SIRPB1O00241 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SIRPB1O00241 AC010501.1-201ENST00000606270 1962 ntBASIC20.37■□□□□ 0.85
SIRPB1O00241 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIRPB1O00241 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SIRPB1O00241 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.37■□□□□ 0.85
SIRPB1O00241 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIRPB1O00241 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIRPB1O00241 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.36■□□□□ 0.85
SIRPB1O00241 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.36■□□□□ 0.85
SIRPB1O00241 AC060814.1-201ENST00000554326 538 ntBASIC20.36■□□□□ 0.85
SIRPB1O00241 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIRPB1O00241 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.36■□□□□ 0.85
SIRPB1O00241 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIRPB1O00241 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SIRPB1O00241 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.35■□□□□ 0.85
SIRPB1O00241 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SIRPB1O00241 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.35■□□□□ 0.85
SIRPB1O00241 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIRPB1O00241 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SIRPB1O00241 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIRPB1O00241 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SIRPB1O00241 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIRPB1O00241 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIRPB1O00241 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.34■□□□□ 0.85
SIRPB1O00241 AC020928.2-201ENST00000588717 2197 ntBASIC20.34■□□□□ 0.85
SIRPB1O00241 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIRPB1O00241 AL157400.5-201ENST00000507624 621 ntBASIC20.34■□□□□ 0.85
SIRPB1O00241 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SIRPB1O00241 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SIRPB1O00241 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SIRPB1O00241 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SIRPB1O00241 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SIRPB1O00241 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SIRPB1O00241 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.33■□□□□ 0.85
SIRPB1O00241 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.33■□□□□ 0.85
SIRPB1O00241 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SIRPB1O00241 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.33■□□□□ 0.84
SIRPB1O00241 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIRPB1O00241 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIRPB1O00241 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIRPB1O00241 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SIRPB1O00241 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SIRPB1O00241 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIRPB1O00241 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SIRPB1O00241 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SIRPB1O00241 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIRPB1O00241 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.32■□□□□ 0.84
SIRPB1O00241 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIRPB1O00241 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SIRPB1O00241 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SIRPB1O00241 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIRPB1O00241 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.31■□□□□ 0.84
SIRPB1O00241 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIRPB1O00241 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIRPB1O00241 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIRPB1O00241 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.3■□□□□ 0.84
SIRPB1O00241 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.3■□□□□ 0.84
SIRPB1O00241 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.3■□□□□ 0.84
SIRPB1O00241 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIRPB1O00241 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIRPB1O00241 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIRPB1O00241 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIRPB1O00241 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.3■□□□□ 0.84
SIRPB1O00241 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIRPB1O00241 AC022413.1-201ENST00000624602 984 ntBASIC20.3■□□□□ 0.84
SIRPB1O00241 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SIRPB1O00241 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIRPB1O00241 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SIRPB1O00241 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIRPB1O00241 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SIRPB1O00241 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SIRPB1O00241 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.29■□□□□ 0.84
SIRPB1O00241 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIRPB1O00241 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.29■□□□□ 0.84
SIRPB1O00241 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.29■□□□□ 0.84
SIRPB1O00241 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.29■□□□□ 0.84
SIRPB1O00241 AC135731.1-201ENST00000569415 2548 ntBASIC20.29■□□□□ 0.84
SIRPB1O00241 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIRPB1O00241 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SIRPB1O00241 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIRPB1O00241 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIRPB1O00241 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.28■□□□□ 0.84
SIRPB1O00241 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIRPB1O00241 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIRPB1O00241 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIRPB1O00241 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
SIRPB1O00241 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIRPB1O00241 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.27■□□□□ 0.84
SIRPB1O00241 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIRPB1O00241 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SIRPB1O00241 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.27■□□□□ 0.83
SIRPB1O00241 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIRPB1O00241 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.26■□□□□ 0.83
SIRPB1O00241 AC096887.2-201ENST00000623443 1957 ntBASIC20.26■□□□□ 0.83
SIRPB1O00241 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIRPB1O00241 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.25■□□□□ 0.83
SIRPB1O00241 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms