Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.15■□□□□ 0.66
LINC01548A6NM66 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.15■□□□□ 0.66
LINC01548A6NM66 AC129492.7-201ENST00000622992 756 ntBASIC19.15■□□□□ 0.66
LINC01548A6NM66 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01548A6NM66 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01548A6NM66 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01548A6NM66 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.15■□□□□ 0.66
LINC01548A6NM66 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01548A6NM66 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01548A6NM66 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LINC01548A6NM66 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01548A6NM66 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01548A6NM66 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01548A6NM66 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01548A6NM66 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LINC01548A6NM66 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01548A6NM66 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01548A6NM66 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01548A6NM66 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01548A6NM66 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01548A6NM66 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.12■□□□□ 0.65
LINC01548A6NM66 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.12■□□□□ 0.65
LINC01548A6NM66 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01548A6NM66 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LINC01548A6NM66 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01548A6NM66 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LINC01548A6NM66 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01548A6NM66 AC004987.1-201ENST00000428627 508 ntBASIC19.12■□□□□ 0.65
LINC01548A6NM66 AL033527.3-201ENST00000566366 1196 ntBASIC19.12■□□□□ 0.65
LINC01548A6NM66 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.12■□□□□ 0.65
LINC01548A6NM66 AC012354.3-201ENST00000623734 483 ntBASIC19.12■□□□□ 0.65
LINC01548A6NM66 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC01548A6NM66 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.11■□□□□ 0.65
LINC01548A6NM66 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC01548A6NM66 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC01548A6NM66 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
LINC01548A6NM66 DUX4L9-201ENST00000449051 1259 ntBASIC19.11■□□□□ 0.65
LINC01548A6NM66 DUX4L18-201ENST00000553347 1267 ntBASIC19.11■□□□□ 0.65
LINC01548A6NM66 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LINC01548A6NM66 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LINC01548A6NM66 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LINC01548A6NM66 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01548A6NM66 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01548A6NM66 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01548A6NM66 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01548A6NM66 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LINC01548A6NM66 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
LINC01548A6NM66 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01548A6NM66 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01548A6NM66 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01548A6NM66 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01548A6NM66 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LINC01548A6NM66 ATP5G2P3-201ENST00000429083 425 ntBASIC19.09■□□□□ 0.65
LINC01548A6NM66 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LINC01548A6NM66 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01548A6NM66 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LINC01548A6NM66 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
LINC01548A6NM66 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LINC01548A6NM66 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LINC01548A6NM66 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.08■□□□□ 0.64
LINC01548A6NM66 ERN1-208ENST00000606895 2068 ntBASIC19.08■□□□□ 0.64
LINC01548A6NM66 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LINC01548A6NM66 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LINC01548A6NM66 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.08■□□□□ 0.64
LINC01548A6NM66 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LINC01548A6NM66 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.08■□□□□ 0.64
LINC01548A6NM66 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01548A6NM66 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01548A6NM66 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.07■□□□□ 0.64
LINC01548A6NM66 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01548A6NM66 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01548A6NM66 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LINC01548A6NM66 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01548A6NM66 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.07■□□□□ 0.64
LINC01548A6NM66 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01548A6NM66 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01548A6NM66 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.06■□□□□ 0.64
LINC01548A6NM66 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01548A6NM66 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.05■□□□□ 0.64
LINC01548A6NM66 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC01548A6NM66 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LINC01548A6NM66 TSPY13P-201ENST00000338964 914 ntBASIC19.05■□□□□ 0.64
LINC01548A6NM66 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LINC01548A6NM66 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.05■□□□□ 0.64
LINC01548A6NM66 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01548A6NM66 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.04■□□□□ 0.64
LINC01548A6NM66 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01548A6NM66 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.04■□□□□ 0.64
LINC01548A6NM66 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01548A6NM66 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01548A6NM66 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.04■□□□□ 0.64
LINC01548A6NM66 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01548A6NM66 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01548A6NM66 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01548A6NM66 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
LINC01548A6NM66 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.04■□□□□ 0.64
LINC01548A6NM66 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01548A6NM66 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LINC01548A6NM66 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
LINC01548A6NM66 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms