Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 SIGLEC16-201ENST00000599858 1437 ntBASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 AL356488.2-201ENST00000602755 427 ntBASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA6Q9Y5G7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
PCDHGA6Q9Y5G7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PCDHGA6Q9Y5G7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 AC103564.2-201ENST00000432853 1299 ntBASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 DUTP2-201ENST00000519164 463 ntBASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGA6Q9Y5G7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 UNC93B6-202ENST00000528242 690 ntBASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 PGM5P2-202ENST00000637225 1043 ntBASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 AC022898.2-201ENST00000616822 1312 ntBASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PCDHGA6Q9Y5G7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms