Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 GPR32P1-201ENST00000601788 811 ntBASIC13.12□□□□□ -0.31
VGLL1Q99990 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.12□□□□□ -0.31
VGLL1Q99990 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
VGLL1Q99990 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
VGLL1Q99990 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
VGLL1Q99990 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.12□□□□□ -0.31
VGLL1Q99990 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.12□□□□□ -0.31
VGLL1Q99990 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.12□□□□□ -0.31
VGLL1Q99990 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
VGLL1Q99990 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
VGLL1Q99990 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
VGLL1Q99990 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
VGLL1Q99990 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
VGLL1Q99990 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.12□□□□□ -0.31
VGLL1Q99990 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
VGLL1Q99990 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
VGLL1Q99990 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
VGLL1Q99990 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.11□□□□□ -0.31
VGLL1Q99990 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.11□□□□□ -0.31
VGLL1Q99990 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
VGLL1Q99990 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
VGLL1Q99990 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
VGLL1Q99990 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
VGLL1Q99990 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.11□□□□□ -0.31
VGLL1Q99990 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
VGLL1Q99990 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VGLL1Q99990 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
VGLL1Q99990 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
VGLL1Q99990 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VGLL1Q99990 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 SLC25A1P3-201ENST00000395415 828 ntBASIC13.11□□□□□ -0.31
VGLL1Q99990 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.11□□□□□ -0.31
VGLL1Q99990 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.11□□□□□ -0.31
VGLL1Q99990 AC002558.1-201ENST00000488906 803 ntBASIC13.11□□□□□ -0.31
VGLL1Q99990 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.11□□□□□ -0.31
VGLL1Q99990 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.11□□□□□ -0.31
VGLL1Q99990 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
VGLL1Q99990 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 AC139887.4-201ENST00000607877 719 ntBASIC13.11□□□□□ -0.31
VGLL1Q99990 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.11□□□□□ -0.31
VGLL1Q99990 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
VGLL1Q99990 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VGLL1Q99990 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.11□□□□□ -0.31
VGLL1Q99990 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VGLL1Q99990 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
VGLL1Q99990 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VGLL1Q99990 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
VGLL1Q99990 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VGLL1Q99990 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.11□□□□□ -0.31
VGLL1Q99990 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 AC010460.3-201ENST00000511359 1579 ntBASIC13.11□□□□□ -0.31
VGLL1Q99990 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.11□□□□□ -0.31
VGLL1Q99990 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
VGLL1Q99990 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
VGLL1Q99990 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VGLL1Q99990 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VGLL1Q99990 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms