Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.78■□□□□ 0.28
NCLNQ969V3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.78■□□□□ 0.28
NCLNQ969V3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.78■□□□□ 0.28
NCLNQ969V3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.78■□□□□ 0.28
NCLNQ969V3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCLNQ969V3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCLNQ969V3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCLNQ969V3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.78■□□□□ 0.28
NCLNQ969V3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCLNQ969V3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCLNQ969V3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCLNQ969V3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NCLNQ969V3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NCLNQ969V3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
NCLNQ969V3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCLNQ969V3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.77■□□□□ 0.28
NCLNQ969V3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCLNQ969V3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCLNQ969V3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
NCLNQ969V3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCLNQ969V3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCLNQ969V3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCLNQ969V3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.77■□□□□ 0.28
NCLNQ969V3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCLNQ969V3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCLNQ969V3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.77■□□□□ 0.28
NCLNQ969V3 AC068472.1-201ENST00000474589 881 ntBASIC16.77■□□□□ 0.28
NCLNQ969V3 VENTXP7-201ENST00000475503 772 ntBASIC16.77■□□□□ 0.28
NCLNQ969V3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.77■□□□□ 0.28
NCLNQ969V3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.77■□□□□ 0.28
NCLNQ969V3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.77■□□□□ 0.28
NCLNQ969V3 AC011840.4-201ENST00000578471 627 ntBASIC16.77■□□□□ 0.28
NCLNQ969V3 MIR3652-201ENST00000579335 131 ntBASIC16.77■□□□□ 0.28
NCLNQ969V3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.77■□□□□ 0.28
NCLNQ969V3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.77■□□□□ 0.28
NCLNQ969V3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCLNQ969V3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCLNQ969V3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCLNQ969V3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCLNQ969V3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NCLNQ969V3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCLNQ969V3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.77■□□□□ 0.27
NCLNQ969V3 AC009949.1-201ENST00000623048 1830 ntBASIC16.77■□□□□ 0.27
NCLNQ969V3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCLNQ969V3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCLNQ969V3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCLNQ969V3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
NCLNQ969V3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCLNQ969V3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCLNQ969V3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.77■□□□□ 0.27
NCLNQ969V3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCLNQ969V3 AC233702.3-201ENST00000578656 1387 ntBASIC16.77■□□□□ 0.27
NCLNQ969V3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCLNQ969V3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCLNQ969V3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCLNQ969V3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCLNQ969V3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCLNQ969V3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCLNQ969V3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
NCLNQ969V3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCLNQ969V3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCLNQ969V3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCLNQ969V3 AC063926.3-201ENST00000624734 5658 ntBASIC16.76■□□□□ 0.27
NCLNQ969V3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.76■□□□□ 0.27
NCLNQ969V3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCLNQ969V3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCLNQ969V3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCLNQ969V3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.76■□□□□ 0.27
NCLNQ969V3 AL845331.1-201ENST00000424978 1190 ntBASIC16.76■□□□□ 0.27
NCLNQ969V3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.76■□□□□ 0.27
NCLNQ969V3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.76■□□□□ 0.27
NCLNQ969V3 CLEC4GP1-201ENST00000596555 870 ntBASIC16.76■□□□□ 0.27
NCLNQ969V3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCLNQ969V3 Z69720.1-201ENST00000601483 472 ntBASIC16.76■□□□□ 0.27
NCLNQ969V3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
NCLNQ969V3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCLNQ969V3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCLNQ969V3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.76■□□□□ 0.27
NCLNQ969V3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.76■□□□□ 0.27
NCLNQ969V3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NCLNQ969V3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCLNQ969V3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.75■□□□□ 0.27
NCLNQ969V3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.75■□□□□ 0.27
NCLNQ969V3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.75■□□□□ 0.27
NCLNQ969V3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NCLNQ969V3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCLNQ969V3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.75■□□□□ 0.27
NCLNQ969V3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NCLNQ969V3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.75■□□□□ 0.27
NCLNQ969V3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
NCLNQ969V3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCLNQ969V3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NCLNQ969V3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NCLNQ969V3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCLNQ969V3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.75■□□□□ 0.27
NCLNQ969V3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.75■□□□□ 0.27
NCLNQ969V3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCLNQ969V3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NCLNQ969V3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
NCLNQ969V3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms