Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 RNF216P1-203ENST00000404404 2427 ntBASIC15.23■□□□□ 0.03
DNAAF1Q8NEP3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DNAAF1Q8NEP3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.23■□□□□ 0.03
DNAAF1Q8NEP3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DNAAF1Q8NEP3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DNAAF1Q8NEP3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DNAAF1Q8NEP3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
DNAAF1Q8NEP3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 AP003733.1-201ENST00000491725 852 ntBASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 AC139887.4-201ENST00000607877 719 ntBASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 AC073508.3-201ENST00000619697 1419 ntBASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNAAF1Q8NEP3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 ZNF444P1-201ENST00000559497 298 ntBASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DNAAF1Q8NEP3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
DNAAF1Q8NEP3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
DNAAF1Q8NEP3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.21■□□□□ 0.02
DNAAF1Q8NEP3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.21■□□□□ 0.02
DNAAF1Q8NEP3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
DNAAF1Q8NEP3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
DNAAF1Q8NEP3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.21■□□□□ 0.02
DNAAF1Q8NEP3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
DNAAF1Q8NEP3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
DNAAF1Q8NEP3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
DNAAF1Q8NEP3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DNAAF1Q8NEP3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms