Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.81■□□□□ 0.12
CDC42P60953 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42P60953 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.81■□□□□ 0.12
CDC42P60953 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.81■□□□□ 0.12
CDC42P60953 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42P60953 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.81■□□□□ 0.12
CDC42P60953 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
CDC42P60953 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.81■□□□□ 0.12
CDC42P60953 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42P60953 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42P60953 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.81■□□□□ 0.12
CDC42P60953 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42P60953 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CDC42P60953 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42P60953 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDC42P60953 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.8■□□□□ 0.12
CDC42P60953 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42P60953 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CDC42P60953 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42P60953 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42P60953 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.8■□□□□ 0.12
CDC42P60953 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.8■□□□□ 0.12
CDC42P60953 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.8■□□□□ 0.12
CDC42P60953 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42P60953 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42P60953 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42P60953 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42P60953 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42P60953 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.8■□□□□ 0.12
CDC42P60953 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.8■□□□□ 0.12
CDC42P60953 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDC42P60953 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.8■□□□□ 0.12
CDC42P60953 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42P60953 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42P60953 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
CDC42P60953 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42P60953 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.8■□□□□ 0.12
CDC42P60953 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42P60953 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.8■□□□□ 0.12
CDC42P60953 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.8■□□□□ 0.12
CDC42P60953 AC034232.1-201ENST00000506026 1064 ntBASIC15.8■□□□□ 0.12
CDC42P60953 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.8■□□□□ 0.12
CDC42P60953 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.8■□□□□ 0.12
CDC42P60953 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42P60953 AC004263.2-201ENST00000617183 678 ntBASIC15.8■□□□□ 0.12
CDC42P60953 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.8■□□□□ 0.12
CDC42P60953 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42P60953 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42P60953 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42P60953 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
CDC42P60953 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
CDC42P60953 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.8■□□□□ 0.12
CDC42P60953 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDC42P60953 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42P60953 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.8■□□□□ 0.12
CDC42P60953 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42P60953 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42P60953 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDC42P60953 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.79■□□□□ 0.12
CDC42P60953 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC42P60953 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.79■□□□□ 0.12
CDC42P60953 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.79■□□□□ 0.12
CDC42P60953 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.79■□□□□ 0.12
CDC42P60953 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDC42P60953 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC42P60953 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC42P60953 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
CDC42P60953 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.79■□□□□ 0.12
CDC42P60953 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CDC42P60953 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.79■□□□□ 0.12
CDC42P60953 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CDC42P60953 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.79■□□□□ 0.12
CDC42P60953 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.79■□□□□ 0.12
CDC42P60953 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CDC42P60953 MIR4785-201ENST00000585005 73 ntBASIC15.79■□□□□ 0.12
CDC42P60953 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.79■□□□□ 0.12
CDC42P60953 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CDC42P60953 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC42P60953 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDC42P60953 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC42P60953 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CDC42P60953 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.79■□□□□ 0.12
CDC42P60953 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDC42P60953 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CDC42P60953 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC42P60953 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC42P60953 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC42P60953 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC42P60953 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.79■□□□□ 0.12
CDC42P60953 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC42P60953 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDC42P60953 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDC42P60953 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDC42P60953 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDC42P60953 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
CDC42P60953 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.78■□□□□ 0.12
CDC42P60953 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC42P60953 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.78■□□□□ 0.12
CDC42P60953 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDC42P60953 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms