Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BCKDHBP21953 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
BCKDHBP21953 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
BCKDHBP21953 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.94■□□□□ 0.3
BCKDHBP21953 AC063926.2-201ENST00000623766 1308 ntBASIC16.94■□□□□ 0.3
BCKDHBP21953 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BCKDHBP21953 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BCKDHBP21953 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BCKDHBP21953 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
BCKDHBP21953 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.93■□□□□ 0.3
BCKDHBP21953 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
BCKDHBP21953 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.93■□□□□ 0.3
BCKDHBP21953 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.93■□□□□ 0.3
BCKDHBP21953 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.93■□□□□ 0.3
BCKDHBP21953 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
BCKDHBP21953 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
BCKDHBP21953 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
BCKDHBP21953 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.93■□□□□ 0.3
BCKDHBP21953 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.93■□□□□ 0.3
BCKDHBP21953 AC005225.4-201ENST00000557330 545 ntBASIC16.93■□□□□ 0.3
BCKDHBP21953 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.93■□□□□ 0.3
BCKDHBP21953 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.93■□□□□ 0.3
BCKDHBP21953 AL009183.1-201ENST00000603760 355 ntBASIC16.93■□□□□ 0.3
BCKDHBP21953 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.93■□□□□ 0.3
BCKDHBP21953 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
BCKDHBP21953 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.93■□□□□ 0.3
BCKDHBP21953 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.93■□□□□ 0.3
BCKDHBP21953 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
BCKDHBP21953 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BCKDHBP21953 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
BCKDHBP21953 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BCKDHBP21953 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.92■□□□□ 0.3
BCKDHBP21953 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.92■□□□□ 0.3
BCKDHBP21953 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BCKDHBP21953 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BCKDHBP21953 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BCKDHBP21953 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BCKDHBP21953 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.92■□□□□ 0.3
BCKDHBP21953 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
BCKDHBP21953 HLA-J-202ENST00000469281 1241 ntBASIC16.92■□□□□ 0.3
BCKDHBP21953 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.92■□□□□ 0.3
BCKDHBP21953 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.92■□□□□ 0.3
BCKDHBP21953 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BCKDHBP21953 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BCKDHBP21953 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.92■□□□□ 0.3
BCKDHBP21953 LINC02560-201ENST00000596379 459 ntBASIC16.92■□□□□ 0.3
BCKDHBP21953 AC008761.3-201ENST00000624803 892 ntBASIC16.92■□□□□ 0.3
BCKDHBP21953 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BCKDHBP21953 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BCKDHBP21953 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.92■□□□□ 0.3
BCKDHBP21953 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
BCKDHBP21953 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BCKDHBP21953 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
BCKDHBP21953 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BCKDHBP21953 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BCKDHBP21953 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.92■□□□□ 0.3
BCKDHBP21953 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BCKDHBP21953 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BCKDHBP21953 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BCKDHBP21953 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BCKDHBP21953 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BCKDHBP21953 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
BCKDHBP21953 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.91■□□□□ 0.3
BCKDHBP21953 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BCKDHBP21953 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.91■□□□□ 0.3
BCKDHBP21953 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.91■□□□□ 0.3
BCKDHBP21953 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BCKDHBP21953 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BCKDHBP21953 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BCKDHBP21953 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BCKDHBP21953 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BCKDHBP21953 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BCKDHBP21953 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BCKDHBP21953 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.91■□□□□ 0.3
BCKDHBP21953 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BCKDHBP21953 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.91■□□□□ 0.3
BCKDHBP21953 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.91■□□□□ 0.3
BCKDHBP21953 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BCKDHBP21953 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
BCKDHBP21953 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms