Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
PEX1O43933 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.88■□□□□ 0.29
PEX1O43933 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PEX1O43933 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PEX1O43933 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEX1O43933 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEX1O43933 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.87■□□□□ 0.29
PEX1O43933 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEX1O43933 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
PEX1O43933 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
PEX1O43933 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.87■□□□□ 0.29
PEX1O43933 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
PEX1O43933 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PEX1O43933 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PEX1O43933 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PEX1O43933 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEX1O43933 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEX1O43933 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEX1O43933 ATP5G2P1-201ENST00000433580 426 ntBASIC16.87■□□□□ 0.29
PEX1O43933 KRT18P48-201ENST00000434763 852 ntBASIC16.87■□□□□ 0.29
PEX1O43933 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
PEX1O43933 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.87■□□□□ 0.29
PEX1O43933 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PEX1O43933 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.87■□□□□ 0.29
PEX1O43933 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.87■□□□□ 0.29
PEX1O43933 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEX1O43933 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.87■□□□□ 0.29
PEX1O43933 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEX1O43933 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PEX1O43933 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PEX1O43933 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.87■□□□□ 0.29
PEX1O43933 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PEX1O43933 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEX1O43933 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEX1O43933 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PEX1O43933 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PEX1O43933 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEX1O43933 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.87■□□□□ 0.29
PEX1O43933 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PEX1O43933 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PEX1O43933 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PEX1O43933 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PEX1O43933 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PEX1O43933 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PEX1O43933 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PEX1O43933 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PEX1O43933 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.86■□□□□ 0.29
PEX1O43933 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PEX1O43933 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
PEX1O43933 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PEX1O43933 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PEX1O43933 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PEX1O43933 PVRIG2P-201ENST00000435460 978 ntBASIC16.86■□□□□ 0.29
PEX1O43933 TSSC2-201ENST00000450217 709 ntBASIC16.86■□□□□ 0.29
PEX1O43933 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.86■□□□□ 0.29
PEX1O43933 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PEX1O43933 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.86■□□□□ 0.29
PEX1O43933 AC009065.1-201ENST00000564055 1225 ntBASIC16.86■□□□□ 0.29
PEX1O43933 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
PEX1O43933 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PEX1O43933 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PEX1O43933 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.86■□□□□ 0.29
PEX1O43933 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PEX1O43933 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
PEX1O43933 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.86■□□□□ 0.29
PEX1O43933 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.86■□□□□ 0.29
PEX1O43933 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PEX1O43933 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.86■□□□□ 0.29
PEX1O43933 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.86■□□□□ 0.29
PEX1O43933 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PEX1O43933 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PEX1O43933 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PEX1O43933 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.86■□□□□ 0.29
PEX1O43933 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PEX1O43933 AC060834.1-201ENST00000443027 2032 ntBASIC16.86■□□□□ 0.29
PEX1O43933 SDHAP2-201ENST00000455183 2001 ntBASIC16.86■□□□□ 0.29
PEX1O43933 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PEX1O43933 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PEX1O43933 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PEX1O43933 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PEX1O43933 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PEX1O43933 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PEX1O43933 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PEX1O43933 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.85■□□□□ 0.29
PEX1O43933 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PEX1O43933 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PEX1O43933 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PEX1O43933 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PEX1O43933 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PEX1O43933 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PEX1O43933 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PEX1O43933 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PEX1O43933 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PEX1O43933 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PEX1O43933 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.85■□□□□ 0.29
PEX1O43933 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PEX1O43933 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PEX1O43933 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PEX1O43933 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PEX1O43933 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms