Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRICKLE3O43900 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
PRICKLE3O43900 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE3O43900 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE3O43900 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE3O43900 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.53■□□□□ 0.24
PRICKLE3O43900 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE3O43900 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE3O43900 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE3O43900 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
PRICKLE3O43900 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE3O43900 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PRICKLE3O43900 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PRICKLE3O43900 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PRICKLE3O43900 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE3O43900 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE3O43900 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE3O43900 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE3O43900 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE3O43900 AL022342.1-201ENST00000400363 863 ntBASIC16.53■□□□□ 0.24
PRICKLE3O43900 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.53■□□□□ 0.24
PRICKLE3O43900 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PRICKLE3O43900 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.53■□□□□ 0.24
PRICKLE3O43900 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.53■□□□□ 0.24
PRICKLE3O43900 RPL13AP23-201ENST00000480739 586 ntBASIC16.53■□□□□ 0.24
PRICKLE3O43900 SLC25A1P1-201ENST00000528351 927 ntBASIC16.53■□□□□ 0.24
PRICKLE3O43900 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.53■□□□□ 0.24
PRICKLE3O43900 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE3O43900 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.53■□□□□ 0.24
PRICKLE3O43900 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.53■□□□□ 0.24
PRICKLE3O43900 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE3O43900 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRICKLE3O43900 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PRICKLE3O43900 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.53■□□□□ 0.24
PRICKLE3O43900 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRICKLE3O43900 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRICKLE3O43900 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRICKLE3O43900 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PRICKLE3O43900 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRICKLE3O43900 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRICKLE3O43900 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRICKLE3O43900 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRICKLE3O43900 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
PRICKLE3O43900 AC034105.1-201ENST00000563488 319 ntBASIC16.52■□□□□ 0.24
PRICKLE3O43900 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PRICKLE3O43900 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRICKLE3O43900 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRICKLE3O43900 AC120114.3-201ENST00000611923 658 ntBASIC16.52■□□□□ 0.24
PRICKLE3O43900 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
PRICKLE3O43900 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRICKLE3O43900 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.52■□□□□ 0.23
PRICKLE3O43900 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRICKLE3O43900 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRICKLE3O43900 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.52■□□□□ 0.23
PRICKLE3O43900 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRICKLE3O43900 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRICKLE3O43900 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PRICKLE3O43900 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRICKLE3O43900 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRICKLE3O43900 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
PRICKLE3O43900 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRICKLE3O43900 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PRICKLE3O43900 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PRICKLE3O43900 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.52■□□□□ 0.23
PRICKLE3O43900 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRICKLE3O43900 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRICKLE3O43900 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRICKLE3O43900 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PRICKLE3O43900 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRICKLE3O43900 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.51■□□□□ 0.23
PRICKLE3O43900 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
PRICKLE3O43900 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRICKLE3O43900 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRICKLE3O43900 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.51■□□□□ 0.23
PRICKLE3O43900 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.51■□□□□ 0.23
PRICKLE3O43900 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRICKLE3O43900 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRICKLE3O43900 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PRICKLE3O43900 AC108073.2-201ENST00000464002 357 ntBASIC16.51■□□□□ 0.23
PRICKLE3O43900 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.51■□□□□ 0.23
PRICKLE3O43900 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.51■□□□□ 0.23
PRICKLE3O43900 AC106730.1-201ENST00000566722 1090 ntBASIC16.51■□□□□ 0.23
PRICKLE3O43900 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRICKLE3O43900 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.51■□□□□ 0.23
PRICKLE3O43900 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PRICKLE3O43900 Z83851.2-201ENST00000609564 659 ntBASIC16.51■□□□□ 0.23
PRICKLE3O43900 GGTLC5P-201ENST00000617623 998 ntBASIC16.51■□□□□ 0.23
PRICKLE3O43900 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.51■□□□□ 0.23
PRICKLE3O43900 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRICKLE3O43900 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRICKLE3O43900 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRICKLE3O43900 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.51■□□□□ 0.23
PRICKLE3O43900 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.51■□□□□ 0.23
PRICKLE3O43900 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRICKLE3O43900 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PRICKLE3O43900 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRICKLE3O43900 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRICKLE3O43900 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.51■□□□□ 0.23
PRICKLE3O43900 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRICKLE3O43900 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms