Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.19■□□□□ 0.34
PHGDHO43175 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.19■□□□□ 0.34
PHGDHO43175 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PHGDHO43175 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PHGDHO43175 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PHGDHO43175 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PHGDHO43175 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHGDHO43175 AL353593.2-201ENST00000602529 1483 ntBASIC17.18■□□□□ 0.34
PHGDHO43175 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PHGDHO43175 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PHGDHO43175 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PHGDHO43175 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PHGDHO43175 AC016734.2-201ENST00000624325 1377 ntBASIC17.18■□□□□ 0.34
PHGDHO43175 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PHGDHO43175 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PHGDHO43175 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PHGDHO43175 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PHGDHO43175 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PHGDHO43175 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PHGDHO43175 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PHGDHO43175 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PHGDHO43175 CHCHD2P8-201ENST00000429873 447 ntBASIC17.18■□□□□ 0.34
PHGDHO43175 AC246785.2-201ENST00000432512 513 ntBASIC17.18■□□□□ 0.34
PHGDHO43175 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.18■□□□□ 0.34
PHGDHO43175 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PHGDHO43175 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PHGDHO43175 AL121672.3-201ENST00000608644 468 ntBASIC17.18■□□□□ 0.34
PHGDHO43175 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PHGDHO43175 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PHGDHO43175 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PHGDHO43175 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PHGDHO43175 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PHGDHO43175 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
PHGDHO43175 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.18■□□□□ 0.34
PHGDHO43175 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.17■□□□□ 0.34
PHGDHO43175 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.17■□□□□ 0.34
PHGDHO43175 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 AL135999.2-201ENST00000622438 1686 ntBASIC17.17■□□□□ 0.34
PHGDHO43175 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PHGDHO43175 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
PHGDHO43175 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.17■□□□□ 0.34
PHGDHO43175 EGFEM1P-202ENST00000431685 1563 ntBASIC17.17■□□□□ 0.34
PHGDHO43175 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PHGDHO43175 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.17■□□□□ 0.34
PHGDHO43175 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.17■□□□□ 0.34
PHGDHO43175 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.17■□□□□ 0.34
PHGDHO43175 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.17■□□□□ 0.34
PHGDHO43175 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PHGDHO43175 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.17■□□□□ 0.34
PHGDHO43175 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.17■□□□□ 0.34
PHGDHO43175 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.17■□□□□ 0.34
PHGDHO43175 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.17■□□□□ 0.34
PHGDHO43175 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PHGDHO43175 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PHGDHO43175 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.16■□□□□ 0.34
PHGDHO43175 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 PCDHB19P-201ENST00000570871 2371 ntBASIC17.16■□□□□ 0.34
PHGDHO43175 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PHGDHO43175 AC009336.1-201ENST00000608941 1553 ntBASIC17.16■□□□□ 0.34
PHGDHO43175 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.16■□□□□ 0.34
PHGDHO43175 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.16■□□□□ 0.34
PHGDHO43175 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PHGDHO43175 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PHGDHO43175 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.16■□□□□ 0.34
PHGDHO43175 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PHGDHO43175 VENTXP7-201ENST00000475503 772 ntBASIC17.16■□□□□ 0.34
PHGDHO43175 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.16■□□□□ 0.34
PHGDHO43175 FAM86EP-206ENST00000510506 987 ntBASIC17.16■□□□□ 0.34
PHGDHO43175 STK19B-204ENST00000512515 211 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms