Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HCFC2Q9Y5Z7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 SLC25A39P2-201ENST00000537614 270 ntBASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 KRT8P23-201ENST00000560090 1207 ntBASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 AL390754.1-201ENST00000619088 582 ntBASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 LINC01451-201ENST00000623792 534 ntBASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.92■□□□□ 0.46
HCFC2Q9Y5Z7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 SPDYE7P-202ENST00000420373 878 ntBASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 IGHV3-42-201ENST00000520410 361 ntBASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 AC084121.4-201ENST00000641598 221 ntBASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 AF228730.8-201ENST00000642140 221 ntBASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 AC012569.1-201ENST00000591191 1524 ntBASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 AC138028.4-201ENST00000564984 1845 ntBASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC2Q9Y5Z7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 FAM207CP-201ENST00000443486 507 ntBASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 AC005225.4-201ENST00000557330 545 ntBASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC2Q9Y5Z7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HCFC2Q9Y5Z7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HCFC2Q9Y5Z7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HCFC2Q9Y5Z7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms