Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 AC079776.2-201ENST00000641154 1609 ntBASIC12.07□□□□□ -0.48
UPK3BQ9BT76 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 HLA-A-201ENST00000376802 1334 ntBASIC12.07□□□□□ -0.48
UPK3BQ9BT76 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC12.07□□□□□ -0.48
UPK3BQ9BT76 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 AC018695.7-201ENST00000624587 2492 ntBASIC12.06□□□□□ -0.48
UPK3BQ9BT76 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 AC003669.1-201ENST00000334569 611 ntBASIC12.06□□□□□ -0.48
UPK3BQ9BT76 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 MYCLP1-201ENST00000372451 1075 ntBASIC12.06□□□□□ -0.48
UPK3BQ9BT76 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 PRYP5-201ENST00000451909 266 ntBASIC12.06□□□□□ -0.48
UPK3BQ9BT76 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 AC002558.1-201ENST00000488906 803 ntBASIC12.06□□□□□ -0.48
UPK3BQ9BT76 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 TPR-209ENST00000613151 2478 ntTSL 5 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK3BQ9BT76 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 STK4-201ENST00000372801 2038 ntTSL 2 BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
UPK3BQ9BT76 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms