Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CPNE1Q99829 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CPNE1Q99829 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CPNE1Q99829 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE1Q99829 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE1Q99829 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.27■□□□□ 0.36
CPNE1Q99829 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CPNE1Q99829 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE1Q99829 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE1Q99829 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.27■□□□□ 0.36
CPNE1Q99829 UBALD1-205ENST00000590891 2641 ntBASIC17.27■□□□□ 0.36
CPNE1Q99829 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE1Q99829 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CPNE1Q99829 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CPNE1Q99829 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE1Q99829 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE1Q99829 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE1Q99829 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE1Q99829 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.27■□□□□ 0.36
CPNE1Q99829 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE1Q99829 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.27■□□□□ 0.36
CPNE1Q99829 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CPNE1Q99829 AC011467.2-201ENST00000598425 242 ntBASIC17.27■□□□□ 0.36
CPNE1Q99829 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.27■□□□□ 0.36
CPNE1Q99829 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE1Q99829 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE1Q99829 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE1Q99829 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CPNE1Q99829 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CPNE1Q99829 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CPNE1Q99829 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE1Q99829 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.27■□□□□ 0.35
CPNE1Q99829 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE1Q99829 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE1Q99829 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.27■□□□□ 0.35
CPNE1Q99829 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE1Q99829 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.27■□□□□ 0.35
CPNE1Q99829 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE1Q99829 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE1Q99829 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE1Q99829 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CPNE1Q99829 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CPNE1Q99829 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CPNE1Q99829 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.26■□□□□ 0.35
CPNE1Q99829 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE1Q99829 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.26■□□□□ 0.35
CPNE1Q99829 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CPNE1Q99829 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.26■□□□□ 0.35
CPNE1Q99829 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.26■□□□□ 0.35
CPNE1Q99829 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.26■□□□□ 0.35
CPNE1Q99829 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE1Q99829 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CPNE1Q99829 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.26■□□□□ 0.35
CPNE1Q99829 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE1Q99829 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.26■□□□□ 0.35
CPNE1Q99829 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE1Q99829 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE1Q99829 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE1Q99829 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE1Q99829 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CPNE1Q99829 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE1Q99829 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE1Q99829 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.26■□□□□ 0.35
CPNE1Q99829 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.26■□□□□ 0.35
CPNE1Q99829 RCN1P1-201ENST00000400413 996 ntBASIC17.26■□□□□ 0.35
CPNE1Q99829 KLF4P1-201ENST00000412782 1185 ntBASIC17.26■□□□□ 0.35
CPNE1Q99829 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.26■□□□□ 0.35
CPNE1Q99829 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.26■□□□□ 0.35
CPNE1Q99829 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.26■□□□□ 0.35
CPNE1Q99829 AD001527.2-201ENST00000622994 785 ntBASIC17.26■□□□□ 0.35
CPNE1Q99829 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE1Q99829 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE1Q99829 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE1Q99829 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE1Q99829 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CPNE1Q99829 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.26■□□□□ 0.35
CPNE1Q99829 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CPNE1Q99829 FRMD8P1-201ENST00000440433 1524 ntBASIC17.26■□□□□ 0.35
CPNE1Q99829 AC132938.5-201ENST00000624980 1813 ntBASIC17.26■□□□□ 0.35
CPNE1Q99829 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE1Q99829 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPNE1Q99829 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.26■□□□□ 0.35
CPNE1Q99829 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CPNE1Q99829 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE1Q99829 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.25■□□□□ 0.35
CPNE1Q99829 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE1Q99829 GPR89P-201ENST00000407924 1495 ntBASIC17.25■□□□□ 0.35
CPNE1Q99829 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE1Q99829 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE1Q99829 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CPNE1Q99829 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE1Q99829 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.25■□□□□ 0.35
CPNE1Q99829 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE1Q99829 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE1Q99829 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE1Q99829 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE1Q99829 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.25■□□□□ 0.35
CPNE1Q99829 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE1Q99829 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPNE1Q99829 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms