Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 DKFZP434H168-201ENST00000567381 1905 ntBASIC10.7□□□□□ -0.7
SVIPQ8NHG7 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 ALDH8A1-201ENST00000265605 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SVIPQ8NHG7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 RABGAP1-213ENST00000616002 1595 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 SORL1-206ENST00000527934 3032 ntTSL 2 BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 AC089987.1-201ENST00000551654 2209 ntBASIC10.69□□□□□ -0.7
SVIPQ8NHG7 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 LAMB3-202ENST00000367030 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 CDKL1-201ENST00000216378 2209 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 ARHGAP36-206ENST00000639280 2685 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 SERINC4-202ENST00000319327 2630 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SVIPQ8NHG7 ABR-205ENST00000544583 5595 ntTSL 2 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 AC092127.1-201ENST00000567093 3455 ntBASIC10.68□□□□□ -0.7
SVIPQ8NHG7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 CR2-203ENST00000367059 3877 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 ASB15-202ENST00000434204 2817 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 AC026396.1-201ENST00000419388 421 ntBASIC10.68□□□□□ -0.7
SVIPQ8NHG7 SERPINA7P1-201ENST00000443077 631 ntBASIC10.68□□□□□ -0.7
SVIPQ8NHG7 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 TPTE-205ENST00000622113 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 GP2-202ENST00000341642 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms