RNA–Protein interactions for RNA: ENST00000367030.7

LAMB3-202, Transcript of laminin subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB3, Length 3,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB3-202ENST00000367030 NISCHQ9Y2I1 1504 aa25.62■■□□□ 1.69
LAMB3-202ENST00000367030 DCAF8L2P0C7V8 631 aa22.66■■□□□ 1.22
LAMB3-202ENST00000367030 SHROOM4Q9ULL8 1493 aa22.52■■□□□ 1.2
LAMB3-202ENST00000367030 SUPT5HO00267 1087 aaKnown RBP22.12■■□□□ 1.13
LAMB3-202ENST00000367030 CCDC180Q9P1Z9 1646 aa21.58■■□□□ 1.05
LAMB3-202ENST00000367030 ZCCHC6Q5VYS8 1495 aaKnown RBP21.5■■□□□ 1.03
LAMB3-202ENST00000367030 ABCC9O60706 1549 aa21.04■□□□□ 0.96
LAMB3-202ENST00000367030 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
LAMB3-202ENST00000367030 SCRIBQ14160 1630 aa20.72■□□□□ 0.91
LAMB3-202ENST00000367030 DCAF1Q9Y4B6 1507 aa20.7■□□□□ 0.9
LAMB3-202ENST00000367030 EHMT2Q96KQ7 1210 aa20.68■□□□□ 0.9
LAMB3-202ENST00000367030 FAM9AQ8IZU1 332 aaPredicted RBP20.59■□□□□ 0.89
LAMB3-202ENST00000367030 TRIM41Q8WV44 630 aa20.5■□□□□ 0.87
LAMB3-202ENST00000367030 LOC105371045A0A1W2PR82 267 aa20.47■□□□□ 0.87
LAMB3-202ENST00000367030 PCGF6Q9BYE7 350 aa20.37■□□□□ 0.85
LAMB3-202ENST00000367030 MYO15BQ96JP2 1530 aa20.37■□□□□ 0.85
LAMB3-202ENST00000367030 PABPN1Q86U42 306 aaKnown RBP eCLIP20.33■□□□□ 0.84
LAMB3-202ENST00000367030 RSF1Q96T23 1441 aaPredicted RBP20.3■□□□□ 0.84
LAMB3-202ENST00000367030 NACADO15069 1562 aa20.28■□□□□ 0.84
LAMB3-202ENST00000367030 CECR2Q9BXF3 1484 aa20.16■□□□□ 0.82
LAMB3-202ENST00000367030 RB1CC1Q8TDY2 1594 aa20.14■□□□□ 0.81
LAMB3-202ENST00000367030 MROH2BQ7Z745 1585 aa19.97■□□□□ 0.79
LAMB3-202ENST00000367030 PPARGC1BQ86YN6 1023 aaKnown RBP19.92■□□□□ 0.78
LAMB3-202ENST00000367030 TTBK1Q5TCY1 1321 aaPredicted RBP19.91■□□□□ 0.78
LAMB3-202ENST00000367030 HRCP23327 699 aa19.83■□□□□ 0.76
LAMB3-202ENST00000367030 TRIM26Q12899 539 aaPredicted RBP19.8■□□□□ 0.76
LAMB3-202ENST00000367030 WIZO95785 1651 aa19.8■□□□□ 0.76
LAMB3-202ENST00000367030 BAZ1AQ9NRL2 1556 aaPredicted RBP19.77■□□□□ 0.75
LAMB3-202ENST00000367030 UBTFP17480 764 aaKnown RBP19.76■□□□□ 0.75
LAMB3-202ENST00000367030 RANGAP1P46060 587 aaPredicted RBP19.73■□□□□ 0.75
LAMB3-202ENST00000367030 PELP1Q8IZL8 1130 aaKnown RBP19.66■□□□□ 0.74
LAMB3-202ENST00000367030 CCDC88BA6NC98 1476 aa19.53■□□□□ 0.72
LAMB3-202ENST00000367030 SMARCA4P51532 1647 aa19.51■□□□□ 0.71
LAMB3-202ENST00000367030 ABCC8Q09428 1581 aa19.46■□□□□ 0.71
LAMB3-202ENST00000367030 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
LAMB3-202ENST00000367030 CSRNP3Q8WYN3 585 aa19.44■□□□□ 0.7
LAMB3-202ENST00000367030 APLP2Q06481 763 aa19.44■□□□□ 0.7
LAMB3-202ENST00000367030 CCER1Q8TC90 406 aaPredicted RBP19.38■□□□□ 0.69
LAMB3-202ENST00000367030 BAZ1BQ9UIG0 1483 aaKnown RBP19.37■□□□□ 0.69
LAMB3-202ENST00000367030 ZEB1P37275 1124 aaPredicted RBP19.34■□□□□ 0.69
LAMB3-202ENST00000367030 UNC13AQ9UPW8 1703 aa19.31■□□□□ 0.68
LAMB3-202ENST00000367030 SOGA1O94964 1423 aa19.31■□□□□ 0.68
LAMB3-202ENST00000367030 SMARCA2P51531 1590 aa19.3■□□□□ 0.68
LAMB3-202ENST00000367030 WRNQ14191 1432 aaPredicted RBP eCLIP19.29■□□□□ 0.68
LAMB3-202ENST00000367030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.27■□□□□ 0.68
LAMB3-202ENST00000367030 BICRAQ9NZM4 1560 aa19.27■□□□□ 0.68
LAMB3-202ENST00000367030 MYT1Q01538 1121 aa19.24■□□□□ 0.67
LAMB3-202ENST00000367030 ATAD2BQ9ULI0 1458 aa19.23■□□□□ 0.67
LAMB3-202ENST00000367030 CEP162Q5TB80 1403 aa19.15■□□□□ 0.66
LAMB3-202ENST00000367030 HNRNPUL2Q1KMD3 747 aaKnown RBP19.15■□□□□ 0.66
LAMB3-202ENST00000367030 RUSC2Q8N2Y8 1516 aa19.14■□□□□ 0.65
LAMB3-202ENST00000367030 ATP1B4Q9UN42 357 aaPredicted RBP19.09■□□□□ 0.65
LAMB3-202ENST00000367030 EEA1Q15075 1411 aa19.09■□□□□ 0.65
LAMB3-202ENST00000367030 TNIKQ9UKE5 1360 aa19.05■□□□□ 0.64
LAMB3-202ENST00000367030 GOLGA3Q08378 1498 aa19.05■□□□□ 0.64
LAMB3-202ENST00000367030 CLIP1P30622 1438 aa18.96■□□□□ 0.63
LAMB3-202ENST00000367030 CEP164Q9UPV0 1460 aa18.94■□□□□ 0.62
LAMB3-202ENST00000367030 EIF4G1Q04637 1599 aaKnown RBP18.93■□□□□ 0.62
LAMB3-202ENST00000367030 ITGAEP38570 1179 aa18.93■□□□□ 0.62
LAMB3-202ENST00000367030 SYNJ1O43426 1573 aa18.87■□□□□ 0.61
LAMB3-202ENST00000367030 PEG3Q9GZU2 1588 aa18.84■□□□□ 0.61
LAMB3-202ENST00000367030 P3H3Q8IVL6 736 aa18.84■□□□□ 0.61
LAMB3-202ENST00000367030 NCAPD3P42695 1498 aa18.82■□□□□ 0.6
LAMB3-202ENST00000367030 RAPGEF2Q9Y4G8 1499 aa18.8■□□□□ 0.6
LAMB3-202ENST00000367030 KIF27Q86VH2 1401 aa18.79■□□□□ 0.6
LAMB3-202ENST00000367030 CUX2O14529 1486 aa18.7■□□□□ 0.58
LAMB3-202ENST00000367030 CADPSQ9ULU8 1353 aa18.7■□□□□ 0.58
LAMB3-202ENST00000367030 VPS8Q8N3P4 1428 aa18.66■□□□□ 0.58
LAMB3-202ENST00000367030 HMGXB3Q12766 1538 aa18.66■□□□□ 0.58
LAMB3-202ENST00000367030 DIEXFQ68CQ4 756 aaKnown RBP18.63■□□□□ 0.57
LAMB3-202ENST00000367030 FAM50AQ14320 339 aaKnown RBP18.63■□□□□ 0.57
LAMB3-202ENST00000367030 CFTRP13569 1480 aa18.61■□□□□ 0.57
LAMB3-202ENST00000367030 TOP2BQ02880 1626 aa18.59■□□□□ 0.57
LAMB3-202ENST00000367030 CUX1P39880 1505 aa18.58■□□□□ 0.57
LAMB3-202ENST00000367030 KANK4Q5T7N3 995 aaPredicted RBP18.57■□□□□ 0.56
LAMB3-202ENST00000367030 CARMIL1Q5VZK9 1371 aa18.57■□□□□ 0.56
LAMB3-202ENST00000367030 YTHDC1Q96MU7 727 aaKnown RBP18.56■□□□□ 0.56
LAMB3-202ENST00000367030 KIF21BO75037 1637 aa18.55■□□□□ 0.56
LAMB3-202ENST00000367030 CC2D2AQ9P2K1 1620 aa18.54■□□□□ 0.56
LAMB3-202ENST00000367030 FANCD2Q9BXW9 1451 aa18.51■□□□□ 0.55
LAMB3-202ENST00000367030 ARID3CA6NKF2 412 aa18.49■□□□□ 0.55
LAMB3-202ENST00000367030 FGD5Q6ZNL6 1462 aa18.48■□□□□ 0.55
LAMB3-202ENST00000367030 ZNF316A6NFI3 1004 aaPredicted RBP18.47■□□□□ 0.55
LAMB3-202ENST00000367030 NESP48681 1621 aa18.46■□□□□ 0.55
LAMB3-202ENST00000367030 IGF1RP08069 1367 aa18.45■□□□□ 0.54
LAMB3-202ENST00000367030 CENPBP07199 599 aaPredicted RBP18.44■□□□□ 0.54
LAMB3-202ENST00000367030 DNAJC5BQ9UF47 199 aa18.44■□□□□ 0.54
LAMB3-202ENST00000367030 PRXQ9BXM0 1461 aa18.43■□□□□ 0.54
LAMB3-202ENST00000367030 TDRD9Q8NDG6 1382 aaKnown RBP18.43■□□□□ 0.54
LAMB3-202ENST00000367030 RAD54L2Q9Y4B4 1467 aa18.42■□□□□ 0.54
LAMB3-202ENST00000367030 FBLN2P98095 1184 aa18.38■□□□□ 0.53
LAMB3-202ENST00000367030 NEUROD1Q13562 356 aa18.38■□□□□ 0.53
LAMB3-202ENST00000367030 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
LAMB3-202ENST00000367030 ARAP1Q96P48 1450 aa18.36■□□□□ 0.53
LAMB3-202ENST00000367030 ERICH3Q5RHP9 1530 aa18.35■□□□□ 0.53
LAMB3-202ENST00000367030 PDS5BQ9NTI5 1447 aa18.31■□□□□ 0.52
LAMB3-202ENST00000367030 CCNB3Q8WWL7 1395 aa18.3■□□□□ 0.52
LAMB3-202ENST00000367030 FHOD3Q2V2M9 1422 aa18.28■□□□□ 0.52
LAMB3-202ENST00000367030 ARHGAP35Q9NRY4 1499 aa18.28■□□□□ 0.52
LAMB3-202ENST00000367030 MTUS2Q5JR59 1369 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms