RNA–Protein interactions for RNA: ENST00000341642.9

GP2-202, Transcript of glycoprotein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GP2, Length 1,975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GP2-202ENST00000341642 NISCHQ9Y2I1 1504 aa26.72■■□□□ 1.87
GP2-202ENST00000341642 CCDC180Q9P1Z9 1646 aa23.39■■□□□ 1.33
GP2-202ENST00000341642 ZCCHC6Q5VYS8 1495 aaKnown RBP22.47■■□□□ 1.19
GP2-202ENST00000341642 ABCC9O60706 1549 aa22.26■■□□□ 1.15
GP2-202ENST00000341642 DCAF8L2P0C7V8 631 aa22.14■■□□□ 1.14
GP2-202ENST00000341642 DCAF1Q9Y4B6 1507 aa22.11■■□□□ 1.13
GP2-202ENST00000341642 SHROOM4Q9ULL8 1493 aa22■■□□□ 1.11
GP2-202ENST00000341642 MYO15BQ96JP2 1530 aa21.94■■□□□ 1.1
GP2-202ENST00000341642 NACADO15069 1562 aa21.82■■□□□ 1.08
GP2-202ENST00000341642 RB1CC1Q8TDY2 1594 aa21.67■■□□□ 1.06
GP2-202ENST00000341642 SCRIBQ14160 1630 aa21.45■■□□□ 1.02
GP2-202ENST00000341642 SUPT5HO00267 1087 aaKnown RBP21.32■■□□□ 1
GP2-202ENST00000341642 UNC13AQ9UPW8 1703 aa21.23■□□□□ 0.99
GP2-202ENST00000341642 BICRAQ9NZM4 1560 aa21.05■□□□□ 0.96
GP2-202ENST00000341642 PABPN1Q86U42 306 aaKnown RBP eCLIP20.94■□□□□ 0.94
GP2-202ENST00000341642 RSF1Q96T23 1441 aaPredicted RBP20.83■□□□□ 0.93
GP2-202ENST00000341642 CECR2Q9BXF3 1484 aa20.76■□□□□ 0.91
GP2-202ENST00000341642 MROH2BQ7Z745 1585 aa20.64■□□□□ 0.9
GP2-202ENST00000341642 BAZ1AQ9NRL2 1556 aaPredicted RBP20.64■□□□□ 0.89
GP2-202ENST00000341642 SMARCA4P51532 1647 aa20.56■□□□□ 0.88
GP2-202ENST00000341642 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
GP2-202ENST00000341642 WIZO95785 1651 aa20.47■□□□□ 0.87
GP2-202ENST00000341642 EIF4G1Q04637 1599 aaKnown RBP20.42■□□□□ 0.86
GP2-202ENST00000341642 PEG3Q9GZU2 1588 aa20.36■□□□□ 0.85
GP2-202ENST00000341642 ATAD2BQ9ULI0 1458 aa20.28■□□□□ 0.84
GP2-202ENST00000341642 TOP2AP11388 1531 aaKnown RBP20.27■□□□□ 0.84
GP2-202ENST00000341642 SMARCA2P51531 1590 aa20.26■□□□□ 0.83
GP2-202ENST00000341642 CC2D2AQ9P2K1 1620 aa20.15■□□□□ 0.82
GP2-202ENST00000341642 NCAPD3P42695 1498 aa20.15■□□□□ 0.82
GP2-202ENST00000341642 BAZ1BQ9UIG0 1483 aaKnown RBP20.15■□□□□ 0.82
GP2-202ENST00000341642 HMGXB3Q12766 1538 aa20.11■□□□□ 0.81
GP2-202ENST00000341642 CCDC88BA6NC98 1476 aa20.11■□□□□ 0.81
GP2-202ENST00000341642 TRIM41Q8WV44 630 aa20.05■□□□□ 0.8
GP2-202ENST00000341642 DNAJC5BQ9UF47 199 aa19.83■□□□□ 0.76
GP2-202ENST00000341642 LOC105371045A0A1W2PR82 267 aa19.74■□□□□ 0.75
GP2-202ENST00000341642 ABCC8Q09428 1581 aa19.72■□□□□ 0.75
GP2-202ENST00000341642 FAM9AQ8IZU1 332 aaPredicted RBP19.68■□□□□ 0.74
GP2-202ENST00000341642 CFTRP13569 1480 aa19.65■□□□□ 0.74
GP2-202ENST00000341642 WRNQ14191 1432 aaPredicted RBP eCLIP19.62■□□□□ 0.73
GP2-202ENST00000341642 CADPSQ9ULU8 1353 aa19.61■□□□□ 0.73
GP2-202ENST00000341642 PRDM2Q13029 1718 aa19.52■□□□□ 0.71
GP2-202ENST00000341642 LAMC3Q9Y6N6 1575 aa19.49■□□□□ 0.71
GP2-202ENST00000341642 NESP48681 1621 aa19.49■□□□□ 0.71
GP2-202ENST00000341642 SYNJ1O43426 1573 aa19.46■□□□□ 0.71
GP2-202ENST00000341642 EEA1Q15075 1411 aa19.45■□□□□ 0.7
GP2-202ENST00000341642 SOGA1O94964 1423 aa19.43■□□□□ 0.7
GP2-202ENST00000341642 AEBP2Q6ZN18 517 aaPredicted RBP19.41■□□□□ 0.7
GP2-202ENST00000341642 EHMT2Q96KQ7 1210 aa19.39■□□□□ 0.7
GP2-202ENST00000341642 FANCD2Q9BXW9 1451 aa19.39■□□□□ 0.69
GP2-202ENST00000341642 TOP2BQ02880 1626 aa19.38■□□□□ 0.69
GP2-202ENST00000341642 CSRNP3Q8WYN3 585 aa19.37■□□□□ 0.69
GP2-202ENST00000341642 PDS5BQ9NTI5 1447 aa19.33■□□□□ 0.69
GP2-202ENST00000341642 BIVM-ERCC5R4GMW8 1640 aa19.33■□□□□ 0.68
GP2-202ENST00000341642 RUSC2Q8N2Y8 1516 aa19.33■□□□□ 0.68
GP2-202ENST00000341642 CUX1P39880 1505 aa19.29■□□□□ 0.68
GP2-202ENST00000341642 CEP164Q9UPV0 1460 aa19.28■□□□□ 0.68
GP2-202ENST00000341642 KIF21AQ7Z4S6 1674 aa19.25■□□□□ 0.67
GP2-202ENST00000341642 TNIKQ9UKE5 1360 aa19.19■□□□□ 0.66
GP2-202ENST00000341642 GOLGA3Q08378 1498 aa19.19■□□□□ 0.66
GP2-202ENST00000341642 DNMBPQ6XZF7 1577 aa19.18■□□□□ 0.66
GP2-202ENST00000341642 UBTFP17480 764 aaKnown RBP19.17■□□□□ 0.66
GP2-202ENST00000341642 URB2Q14146 1524 aaKnown RBP19.17■□□□□ 0.66
GP2-202ENST00000341642 TOPBP1Q92547 1522 aa19.16■□□□□ 0.66
GP2-202ENST00000341642 KIF21BO75037 1637 aa19.13■□□□□ 0.65
GP2-202ENST00000341642 KIF27Q86VH2 1401 aa19.12■□□□□ 0.65
GP2-202ENST00000341642 FGD5Q6ZNL6 1462 aa19.11■□□□□ 0.65
GP2-202ENST00000341642 ERCC6Q03468 1493 aa19.1■□□□□ 0.65
GP2-202ENST00000341642 MRC2Q9UBG0 1479 aa19.1■□□□□ 0.65
GP2-202ENST00000341642 CEP162Q5TB80 1403 aa19.08■□□□□ 0.64
GP2-202ENST00000341642 PCGF6Q9BYE7 350 aa19.07■□□□□ 0.64
GP2-202ENST00000341642 POLA1P09884 1462 aaPredicted RBP19.06■□□□□ 0.64
GP2-202ENST00000341642 WDR62O43379 1518 aa19.03■□□□□ 0.64
GP2-202ENST00000341642 TRIM26Q12899 539 aaPredicted RBP19.02■□□□□ 0.64
GP2-202ENST00000341642 RAPGEF2Q9Y4G8 1499 aa19.02■□□□□ 0.63
GP2-202ENST00000341642 THOC2Q8NI27 1593 aaKnown RBP19.01■□□□□ 0.63
GP2-202ENST00000341642 CUX2O14529 1486 aa19.01■□□□□ 0.63
GP2-202ENST00000341642 PRXQ9BXM0 1461 aa19.01■□□□□ 0.63
GP2-202ENST00000341642 ERICH3Q5RHP9 1530 aa18.98■□□□□ 0.63
GP2-202ENST00000341642 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
GP2-202ENST00000341642 ABCA10Q8WWZ4 1543 aa18.95■□□□□ 0.62
GP2-202ENST00000341642 IGF1RP08069 1367 aa18.93■□□□□ 0.62
GP2-202ENST00000341642 WDR97A6NE52 1622 aa18.91■□□□□ 0.62
GP2-202ENST00000341642 CLIP1P30622 1438 aa18.9■□□□□ 0.62
GP2-202ENST00000341642 TARBP1Q13395 1621 aaKnown RBP18.9■□□□□ 0.62
GP2-202ENST00000341642 SLC24A1O60721 1099 aa18.9■□□□□ 0.62
GP2-202ENST00000341642 CARMIL1Q5VZK9 1371 aa18.84■□□□□ 0.61
GP2-202ENST00000341642 IFT140Q96RY7 1462 aa18.84■□□□□ 0.61
GP2-202ENST00000341642 ABCA5Q8WWZ7 1642 aa18.81■□□□□ 0.6
GP2-202ENST00000341642 TDRD9Q8NDG6 1382 aaKnown RBP18.8■□□□□ 0.6
GP2-202ENST00000341642 PPARGC1BQ86YN6 1023 aaKnown RBP18.8■□□□□ 0.6
GP2-202ENST00000341642 RANGAP1P46060 587 aaPredicted RBP18.79■□□□□ 0.6
GP2-202ENST00000341642 GAPVD1Q14C86 1478 aa18.77■□□□□ 0.59
GP2-202ENST00000341642 VPS8Q8N3P4 1428 aa18.75■□□□□ 0.59
GP2-202ENST00000341642 ZNF608Q9ULD9 1512 aaPredicted RBP18.75■□□□□ 0.59
GP2-202ENST00000341642 AQRO60306 1485 aaKnown RBP eCLIP18.72■□□□□ 0.59
GP2-202ENST00000341642 CUL7Q14999 1698 aa18.69■□□□□ 0.58
GP2-202ENST00000341642 EIF4G3O43432 1585 aaKnown RBP18.68■□□□□ 0.58
GP2-202ENST00000341642 APLP2Q06481 763 aa18.68■□□□□ 0.58
GP2-202ENST00000341642 HRCP23327 699 aa18.67■□□□□ 0.58
GP2-202ENST00000341642 PBRM1Q86U86 1689 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms