Protein–RNA interactions for Protein: Q8N5U1

MS4A15, Membrane-spanning 4-domains subfamily A member 15, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A15Q8N5U1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MS4A15Q8N5U1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.3■□□□□ 0.04
MS4A15Q8N5U1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.3■□□□□ 0.04
MS4A15Q8N5U1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MS4A15Q8N5U1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.3■□□□□ 0.04
MS4A15Q8N5U1 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MS4A15Q8N5U1 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MS4A15Q8N5U1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MS4A15Q8N5U1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.3■□□□□ 0.04
MS4A15Q8N5U1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MS4A15Q8N5U1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 MIR1238-201ENST00000408483 83 ntBASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 AL390955.1-201ENST00000428694 934 ntBASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
MS4A15Q8N5U1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 PCDHB17P-201ENST00000539533 2393 ntBASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 MIR4785-201ENST00000585005 73 ntBASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 AC004263.2-201ENST00000617183 678 ntBASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MS4A15Q8N5U1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms