Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-BQ31612 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-BQ31612 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-BQ31612 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-BQ31612 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-BQ31612 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
HLA-BQ31612 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-BQ31612 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-BQ31612 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-BQ31612 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HLA-BQ31612 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.65■□□□□ 0.26
HLA-BQ31612 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.65■□□□□ 0.26
HLA-BQ31612 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-BQ31612 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.65■□□□□ 0.26
HLA-BQ31612 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HLA-BQ31612 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-BQ31612 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HLA-BQ31612 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.65■□□□□ 0.26
HLA-BQ31612 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-BQ31612 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.65■□□□□ 0.26
HLA-BQ31612 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.65■□□□□ 0.26
HLA-BQ31612 AC087641.1-201ENST00000557561 1021 ntBASIC16.65■□□□□ 0.26
HLA-BQ31612 KRT8P23-201ENST00000560090 1207 ntBASIC16.65■□□□□ 0.26
HLA-BQ31612 LINC01225-203ENST00000563550 1244 ntBASIC16.65■□□□□ 0.26
HLA-BQ31612 AC026150.2-201ENST00000564693 1156 ntBASIC16.65■□□□□ 0.26
HLA-BQ31612 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.65■□□□□ 0.26
HLA-BQ31612 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.65■□□□□ 0.26
HLA-BQ31612 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-BQ31612 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.65■□□□□ 0.26
HLA-BQ31612 AL009183.1-201ENST00000603760 355 ntBASIC16.65■□□□□ 0.26
HLA-BQ31612 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-BQ31612 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-BQ31612 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-BQ31612 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-BQ31612 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-BQ31612 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-BQ31612 AC138028.4-201ENST00000564984 1845 ntBASIC16.65■□□□□ 0.26
HLA-BQ31612 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-BQ31612 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HLA-BQ31612 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-BQ31612 AC063926.2-201ENST00000623766 1308 ntBASIC16.65■□□□□ 0.26
HLA-BQ31612 AC012569.1-201ENST00000591191 1524 ntBASIC16.65■□□□□ 0.26
HLA-BQ31612 AC008677.1-201ENST00000519230 1561 ntBASIC16.64■□□□□ 0.25
HLA-BQ31612 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-BQ31612 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-BQ31612 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-BQ31612 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-BQ31612 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-BQ31612 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-BQ31612 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-BQ31612 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-BQ31612 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HLA-BQ31612 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HLA-BQ31612 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-BQ31612 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-BQ31612 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.64■□□□□ 0.25
HLA-BQ31612 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-BQ31612 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.64■□□□□ 0.25
HLA-BQ31612 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-BQ31612 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-BQ31612 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-BQ31612 TREML5P-201ENST00000421694 576 ntBASIC16.64■□□□□ 0.25
HLA-BQ31612 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
HLA-BQ31612 UGT1A2P-201ENST00000454886 866 ntBASIC16.64■□□□□ 0.25
HLA-BQ31612 IGHV3-42-201ENST00000520410 361 ntBASIC16.64■□□□□ 0.25
HLA-BQ31612 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.64■□□□□ 0.25
HLA-BQ31612 AC140878.1-201ENST00000565277 250 ntBASIC16.64■□□□□ 0.25
HLA-BQ31612 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-BQ31612 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-BQ31612 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-BQ31612 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-BQ31612 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-BQ31612 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.64■□□□□ 0.25
HLA-BQ31612 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HLA-BQ31612 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HLA-BQ31612 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.64■□□□□ 0.25
HLA-BQ31612 AC090164.3-201ENST00000610780 2143 ntBASIC16.64■□□□□ 0.25
HLA-BQ31612 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-BQ31612 AC020763.4-201ENST00000623414 4170 ntBASIC16.64■□□□□ 0.25
HLA-BQ31612 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-BQ31612 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-BQ31612 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-BQ31612 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HLA-BQ31612 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-BQ31612 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
HLA-BQ31612 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-BQ31612 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-BQ31612 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HLA-BQ31612 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-BQ31612 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
HLA-BQ31612 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-BQ31612 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-BQ31612 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-BQ31612 MIR661-201ENST00000384842 89 ntBASIC16.63■□□□□ 0.25
HLA-BQ31612 SPDYE7P-202ENST00000420373 878 ntBASIC16.63■□□□□ 0.25
HLA-BQ31612 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-BQ31612 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.63■□□□□ 0.25
HLA-BQ31612 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-BQ31612 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.63■□□□□ 0.25
HLA-BQ31612 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms