Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A4P31645 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A4P31645 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A4P31645 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A4P31645 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A4P31645 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC6A4P31645 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A4P31645 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A4P31645 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC6A4P31645 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC6A4P31645 EGFEM1P-202ENST00000431685 1563 ntBASIC17.67■□□□□ 0.42
SLC6A4P31645 AC141586.5-201ENST00000624546 2050 ntBASIC17.67■□□□□ 0.42
SLC6A4P31645 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A4P31645 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC6A4P31645 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A4P31645 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A4P31645 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SLC6A4P31645 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A4P31645 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SLC6A4P31645 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SLC6A4P31645 AC087163.2-201ENST00000457299 853 ntBASIC17.67■□□□□ 0.42
SLC6A4P31645 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC6A4P31645 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.67■□□□□ 0.42
SLC6A4P31645 AC018845.2-201ENST00000568326 409 ntBASIC17.67■□□□□ 0.42
SLC6A4P31645 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC6A4P31645 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC6A4P31645 PCDHB18P-201ENST00000524813 2368 ntBASIC17.67■□□□□ 0.42
SLC6A4P31645 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC6A4P31645 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A4P31645 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC6A4P31645 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC6A4P31645 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A4P31645 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC6A4P31645 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A4P31645 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC6A4P31645 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A4P31645 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A4P31645 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A4P31645 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A4P31645 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC6A4P31645 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A4P31645 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A4P31645 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A4P31645 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A4P31645 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A4P31645 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
SLC6A4P31645 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SLC6A4P31645 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A4P31645 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC6A4P31645 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC6A4P31645 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.66■□□□□ 0.42
SLC6A4P31645 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A4P31645 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC6A4P31645 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A4P31645 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC6A4P31645 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A4P31645 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SLC6A4P31645 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SLC6A4P31645 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A4P31645 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A4P31645 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC6A4P31645 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A4P31645 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC6A4P31645 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A4P31645 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC6A4P31645 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A4P31645 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A4P31645 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A4P31645 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A4P31645 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SLC6A4P31645 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC6A4P31645 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A4P31645 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A4P31645 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A4P31645 AC026471.1-201ENST00000564629 3026 ntBASIC17.65■□□□□ 0.42
SLC6A4P31645 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC6A4P31645 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A4P31645 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A4P31645 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SLC6A4P31645 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A4P31645 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A4P31645 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SLC6A4P31645 AC023274.1-201ENST00000418278 595 ntBASIC17.65■□□□□ 0.42
SLC6A4P31645 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC6A4P31645 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC6A4P31645 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC6A4P31645 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC6A4P31645 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC6A4P31645 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.65■□□□□ 0.42
SLC6A4P31645 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC6A4P31645 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SLC6A4P31645 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A4P31645 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC6A4P31645 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A4P31645 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A4P31645 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
SLC6A4P31645 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SLC6A4P31645 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SLC6A4P31645 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SLC6A4P31645 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms