Protein–RNA interactions for Protein: O60486

PLXNC1, Plexin-C1, humanhuman

Predictions only

Length 1,568 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNC1O60486 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC25.31■■□□□ 1.64
PLXNC1O60486 CR383656.12-201ENST00000549567 513 ntBASIC25.31■■□□□ 1.64
PLXNC1O60486 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PLXNC1O60486 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
PLXNC1O60486 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC25.31■■□□□ 1.64
PLXNC1O60486 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
PLXNC1O60486 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC25.31■■□□□ 1.64
PLXNC1O60486 AC104581.1-202ENST00000635932 2618 ntBASIC25.31■■□□□ 1.64
PLXNC1O60486 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC25.31■■□□□ 1.64
PLXNC1O60486 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PLXNC1O60486 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
PLXNC1O60486 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PLXNC1O60486 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PLXNC1O60486 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PLXNC1O60486 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PLXNC1O60486 AC142381.1-201ENST00000426099 345 ntBASIC25.31■■□□□ 1.64
PLXNC1O60486 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC25.31■■□□□ 1.64
PLXNC1O60486 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PLXNC1O60486 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC25.31■■□□□ 1.64
PLXNC1O60486 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
PLXNC1O60486 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC25.31■■□□□ 1.64
PLXNC1O60486 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
PLXNC1O60486 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PLXNC1O60486 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PLXNC1O60486 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC25.3■■□□□ 1.64
PLXNC1O60486 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC25.3■■□□□ 1.64
PLXNC1O60486 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC25.3■■□□□ 1.64
PLXNC1O60486 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PLXNC1O60486 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
PLXNC1O60486 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PLXNC1O60486 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
PLXNC1O60486 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PLXNC1O60486 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PLXNC1O60486 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC25.3■■□□□ 1.64
PLXNC1O60486 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PLXNC1O60486 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PLXNC1O60486 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC25.3■■□□□ 1.64
PLXNC1O60486 HLA-V-201ENST00000429037 534 ntBASIC25.3■■□□□ 1.64
PLXNC1O60486 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC25.3■■□□□ 1.64
PLXNC1O60486 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PLXNC1O60486 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PLXNC1O60486 NOP2-220ENST00000545915 630 ntTSL 2 BASIC25.3■■□□□ 1.64
PLXNC1O60486 AL596325.1-201ENST00000563991 1082 ntBASIC25.3■■□□□ 1.64
PLXNC1O60486 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC25.3■■□□□ 1.64
PLXNC1O60486 AC009118.2-201ENST00000613275 655 ntBASIC25.3■■□□□ 1.64
PLXNC1O60486 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
PLXNC1O60486 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PLXNC1O60486 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
PLXNC1O60486 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC25.3■■□□□ 1.64
PLXNC1O60486 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PLXNC1O60486 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PLXNC1O60486 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PLXNC1O60486 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC25.29■■□□□ 1.64
PLXNC1O60486 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC25.29■■□□□ 1.64
PLXNC1O60486 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC25.29■■□□□ 1.64
PLXNC1O60486 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC25.29■■□□□ 1.64
PLXNC1O60486 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PLXNC1O60486 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
PLXNC1O60486 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PLXNC1O60486 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC25.29■■□□□ 1.64
PLXNC1O60486 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC25.29■■□□□ 1.64
PLXNC1O60486 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
PLXNC1O60486 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PLXNC1O60486 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PLXNC1O60486 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PLXNC1O60486 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
PLXNC1O60486 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PLXNC1O60486 AC016027.1-202ENST00000607927 1699 ntBASIC25.28■■□□□ 1.64
PLXNC1O60486 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PLXNC1O60486 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
PLXNC1O60486 MIR346-201ENST00000362234 95 ntBASIC25.28■■□□□ 1.64
PLXNC1O60486 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PLXNC1O60486 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
PLXNC1O60486 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC25.28■■□□□ 1.64
PLXNC1O60486 IGHV3-62-201ENST00000520057 340 ntBASIC25.28■■□□□ 1.64
PLXNC1O60486 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC25.28■■□□□ 1.64
PLXNC1O60486 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC25.28■■□□□ 1.64
PLXNC1O60486 AC073592.8-201ENST00000624126 511 ntBASIC25.28■■□□□ 1.64
PLXNC1O60486 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PLXNC1O60486 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PLXNC1O60486 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC25.28■■□□□ 1.64
PLXNC1O60486 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
PLXNC1O60486 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PLXNC1O60486 AC116353.5-201ENST00000638148 1699 ntBASIC25.28■■□□□ 1.64
PLXNC1O60486 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC25.28■■□□□ 1.64
PLXNC1O60486 AC012317.2-201ENST00000623305 2251 ntBASIC25.28■■□□□ 1.64
PLXNC1O60486 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
PLXNC1O60486 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PLXNC1O60486 TOP3BP1-201ENST00000420768 1380 ntBASIC25.27■■□□□ 1.64
PLXNC1O60486 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
PLXNC1O60486 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PLXNC1O60486 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC25.27■■□□□ 1.64
PLXNC1O60486 SPTLC1P1-201ENST00000447199 261 ntBASIC25.27■■□□□ 1.64
PLXNC1O60486 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PLXNC1O60486 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC25.27■■□□□ 1.64
PLXNC1O60486 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PLXNC1O60486 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC25.27■■□□□ 1.64
PLXNC1O60486 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC25.27■■□□□ 1.64
PLXNC1O60486 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
PLXNC1O60486 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms