Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXN3O00409 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN3O00409 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN3O00409 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXN3O00409 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN3O00409 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXN3O00409 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN3O00409 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXN3O00409 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
FOXN3O00409 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN3O00409 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN3O00409 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXN3O00409 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN3O00409 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN3O00409 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN3O00409 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
FOXN3O00409 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN3O00409 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN3O00409 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.49■□□□□ 0.55
FOXN3O00409 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.49■□□□□ 0.55
FOXN3O00409 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
FOXN3O00409 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXN3O00409 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN3O00409 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN3O00409 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN3O00409 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN3O00409 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN3O00409 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN3O00409 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
FOXN3O00409 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN3O00409 FRMD8P1-201ENST00000440433 1524 ntBASIC18.49■□□□□ 0.55
FOXN3O00409 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN3O00409 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN3O00409 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN3O00409 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
FOXN3O00409 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN3O00409 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN3O00409 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN3O00409 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN3O00409 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXN3O00409 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.48■□□□□ 0.55
FOXN3O00409 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXN3O00409 AC124947.2-201ENST00000547118 1133 ntBASIC18.48■□□□□ 0.55
FOXN3O00409 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.48■□□□□ 0.55
FOXN3O00409 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.48■□□□□ 0.55
FOXN3O00409 AL732292.2-201ENST00000609649 430 ntBASIC18.48■□□□□ 0.55
FOXN3O00409 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN3O00409 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN3O00409 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN3O00409 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN3O00409 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXN3O00409 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXN3O00409 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN3O00409 AC097637.2-201ENST00000624096 1997 ntBASIC18.48■□□□□ 0.55
FOXN3O00409 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN3O00409 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN3O00409 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN3O00409 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
FOXN3O00409 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN3O00409 GPR89P-201ENST00000407924 1495 ntBASIC18.47■□□□□ 0.55
FOXN3O00409 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
FOXN3O00409 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN3O00409 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXN3O00409 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXN3O00409 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN3O00409 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN3O00409 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.47■□□□□ 0.55
FOXN3O00409 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN3O00409 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN3O00409 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN3O00409 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN3O00409 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.47■□□□□ 0.55
FOXN3O00409 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN3O00409 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.47■□□□□ 0.55
FOXN3O00409 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN3O00409 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
FOXN3O00409 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN3O00409 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXN3O00409 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
FOXN3O00409 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN3O00409 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXN3O00409 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.47■□□□□ 0.55
FOXN3O00409 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN3O00409 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN3O00409 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
FOXN3O00409 FLJ38576-201ENST00000623820 2459 ntBASIC18.47■□□□□ 0.55
FOXN3O00409 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN3O00409 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN3O00409 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
FOXN3O00409 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN3O00409 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.46■□□□□ 0.55
FOXN3O00409 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN3O00409 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN3O00409 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN3O00409 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
FOXN3O00409 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN3O00409 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN3O00409 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.46■□□□□ 0.55
FOXN3O00409 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXN3O00409 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms