Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 TNRC18P2-201ENST00000417666 2714 ntBASIC12.18□□□□□ -0.46
LINC01546A6NGU7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 AC097374.2-201ENST00000618617 1306 ntBASIC12.18□□□□□ -0.46
LINC01546A6NGU7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 ANKRD20A6P-201ENST00000618763 204 ntBASIC12.18□□□□□ -0.46
LINC01546A6NGU7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 LINC00895-201ENST00000629028 1637 ntBASIC12.18□□□□□ -0.46
LINC01546A6NGU7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01546A6NGU7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 IGHV3-52-201ENST00000519770 353 ntBASIC12.17□□□□□ -0.46
LINC01546A6NGU7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 AC142086.2-201ENST00000569753 217 ntBASIC12.17□□□□□ -0.46
LINC01546A6NGU7 AP005242.2-201ENST00000580065 1175 ntBASIC12.17□□□□□ -0.46
LINC01546A6NGU7 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 AC019129.2-201ENST00000609837 1235 ntBASIC12.17□□□□□ -0.46
LINC01546A6NGU7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 AC092865.7-201ENST00000641832 219 ntBASIC12.17□□□□□ -0.46
LINC01546A6NGU7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 AC092338.2-201ENST00000568827 1415 ntBASIC12.17□□□□□ -0.46
LINC01546A6NGU7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC01546A6NGU7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms