Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC46A2Q9BY10 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC46A2Q9BY10 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SLC46A2Q9BY10 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC46A2Q9BY10 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC46A2Q9BY10 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC46A2Q9BY10 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 AC002056.1-201ENST00000395613 760 ntBASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 ADH5P3-201ENST00000433842 1137 ntBASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 AC140658.5-201ENST00000438532 169 ntBASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC46A2Q9BY10 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 MIR4515-201ENST00000584082 81 ntBASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 AC093028.1-201ENST00000622998 982 ntBASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC46A2Q9BY10 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.71■□□□□ 0.42
SLC46A2Q9BY10 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.71■□□□□ 0.42
SLC46A2Q9BY10 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
SLC46A2Q9BY10 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 AC008764.6-201ENST00000595909 2069 ntBASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 AL671277.1-201ENST00000429656 993 ntBASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 AC099522.2-201ENST00000607001 744 ntBASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 AC106028.4-201ENST00000614509 607 ntBASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC46A2Q9BY10 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms