Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LITAFQ99732 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC11.52□□□□□ -0.57
LITAFQ99732 AL645728.1-201ENST00000366221 2101 ntBASIC11.52□□□□□ -0.57
LITAFQ99732 ILF2-202ENST00000368681 726 ntTSL 2 BASIC11.52□□□□□ -0.57
LITAFQ99732 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC11.52□□□□□ -0.57
LITAFQ99732 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
LITAFQ99732 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
LITAFQ99732 AC133681.1-201ENST00000465482 601 ntBASIC11.52□□□□□ -0.57
LITAFQ99732 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LITAFQ99732 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LITAFQ99732 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC11.52□□□□□ -0.57
LITAFQ99732 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC11.52□□□□□ -0.57
LITAFQ99732 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LITAFQ99732 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LITAFQ99732 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LITAFQ99732 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
LITAFQ99732 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LITAFQ99732 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LITAFQ99732 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC11.52□□□□□ -0.57
LITAFQ99732 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC11.52□□□□□ -0.57
LITAFQ99732 AC013268.4-201ENST00000637413 2228 ntBASIC11.52□□□□□ -0.57
LITAFQ99732 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
LITAFQ99732 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
LITAFQ99732 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
LITAFQ99732 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LITAFQ99732 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC11.52□□□□□ -0.57
LITAFQ99732 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC11.52□□□□□ -0.57
LITAFQ99732 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LITAFQ99732 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LITAFQ99732 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LITAFQ99732 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
LITAFQ99732 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC11.52□□□□□ -0.57
LITAFQ99732 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC11.51□□□□□ -0.57
LITAFQ99732 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
LITAFQ99732 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC11.51□□□□□ -0.57
LITAFQ99732 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC11.51□□□□□ -0.57
LITAFQ99732 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC11.51□□□□□ -0.57
LITAFQ99732 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
LITAFQ99732 EGFEM1P-202ENST00000431685 1563 ntBASIC11.51□□□□□ -0.57
LITAFQ99732 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC11.51□□□□□ -0.57
LITAFQ99732 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
LITAFQ99732 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC11.51□□□□□ -0.57
LITAFQ99732 KRT17P3-201ENST00000420566 1262 ntBASIC11.51□□□□□ -0.57
LITAFQ99732 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC11.51□□□□□ -0.57
LITAFQ99732 AL353807.1-201ENST00000427475 662 ntBASIC11.51□□□□□ -0.57
LITAFQ99732 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 AC002558.1-201ENST00000488906 803 ntBASIC11.51□□□□□ -0.57
LITAFQ99732 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC11.51□□□□□ -0.57
LITAFQ99732 AC113404.2-201ENST00000507884 177 ntBASIC11.51□□□□□ -0.57
LITAFQ99732 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC11.51□□□□□ -0.57
LITAFQ99732 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC11.51□□□□□ -0.57
LITAFQ99732 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
LITAFQ99732 AC110285.5-201ENST00000611501 352 ntBASIC11.51□□□□□ -0.57
LITAFQ99732 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC11.51□□□□□ -0.57
LITAFQ99732 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
LITAFQ99732 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LITAFQ99732 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC11.51□□□□□ -0.57
LITAFQ99732 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC11.51□□□□□ -0.57
LITAFQ99732 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LITAFQ99732 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
LITAFQ99732 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC11.5□□□□□ -0.57
LITAFQ99732 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC11.5□□□□□ -0.57
LITAFQ99732 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
LITAFQ99732 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
LITAFQ99732 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC11.5□□□□□ -0.57
LITAFQ99732 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LITAFQ99732 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms