Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMP6Q96FZ7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 AC023824.1-201ENST00000562945 2975 ntBASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 PKD1P5-201ENST00000532415 10291 ntBASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 MIR4785-201ENST00000585005 73 ntBASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 AL365203.3-201ENST00000609742 2057 ntBASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CHMP6Q96FZ7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 AC096733.2-201ENST00000609937 1394 ntBASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 AC093525.9-201ENST00000624961 1746 ntBASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 SLC25A1P3-201ENST00000395415 828 ntBASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 AC005104.2-201ENST00000427818 678 ntBASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 AC104390.1-201ENST00000555663 520 ntBASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 AC092364.2-201ENST00000596710 2692 ntBASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMP6Q96FZ7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms