Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
STAG1Q8WVM7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.3■□□□□ 0.84
STAG1Q8WVM7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 AC009947.1-201ENST00000444350 727 ntBASIC20.3■□□□□ 0.84
STAG1Q8WVM7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
STAG1Q8WVM7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 MIR940-201ENST00000401276 94 ntBASIC20.29■□□□□ 0.84
STAG1Q8WVM7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 AC108073.2-201ENST00000464002 357 ntBASIC20.29■□□□□ 0.84
STAG1Q8WVM7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.29■□□□□ 0.84
STAG1Q8WVM7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
STAG1Q8WVM7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
STAG1Q8WVM7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms