Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
TMC1Q8TDI8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC24.06■■□□□ 1.44
TMC1Q8TDI8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC24.06■■□□□ 1.44
TMC1Q8TDI8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
TMC1Q8TDI8 AC023274.1-201ENST00000418278 595 ntBASIC24.06■■□□□ 1.44
TMC1Q8TDI8 LINC00982-205ENST00000420957 435 ntBASIC24.06■■□□□ 1.44
TMC1Q8TDI8 KRT18P2-201ENST00000447938 1258 ntBASIC24.06■■□□□ 1.44
TMC1Q8TDI8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC24.06■■□□□ 1.44
TMC1Q8TDI8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC24.06■■□□□ 1.44
TMC1Q8TDI8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TMC1Q8TDI8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
TMC1Q8TDI8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TMC1Q8TDI8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
TMC1Q8TDI8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TMC1Q8TDI8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
TMC1Q8TDI8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 AC108073.2-201ENST00000464002 357 ntBASIC24.05■■□□□ 1.44
TMC1Q8TDI8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TMC1Q8TDI8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
TMC1Q8TDI8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 PP12613-201ENST00000424958 2230 ntBASIC24.03■■□□□ 1.44
TMC1Q8TDI8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 PTCHD3P3-201ENST00000403073 906 ntBASIC24.03■■□□□ 1.44
TMC1Q8TDI8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 MIR4751-201ENST00000578027 74 ntBASIC24.03■■□□□ 1.44
TMC1Q8TDI8 AC010327.4-202ENST00000591484 748 ntBASIC24.03■■□□□ 1.44
TMC1Q8TDI8 AL353135.1-201ENST00000606729 504 ntBASIC24.03■■□□□ 1.44
TMC1Q8TDI8 AC004790.2-201ENST00000623588 572 ntBASIC24.03■■□□□ 1.44
TMC1Q8TDI8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TMC1Q8TDI8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
TMC1Q8TDI8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC24.02■■□□□ 1.44
TMC1Q8TDI8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TMC1Q8TDI8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TMC1Q8TDI8 AC133963.1-201ENST00000504166 1679 ntBASIC24.02■■□□□ 1.44
TMC1Q8TDI8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TMC1Q8TDI8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TMC1Q8TDI8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms