Protein–RNA interactions for Protein: Q3SY56

SP6, Transcription factor Sp6, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP6Q3SY56 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.39□□□□□ -0.11
SP6Q3SY56 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SP6Q3SY56 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.39□□□□□ -0.11
SP6Q3SY56 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SP6Q3SY56 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SP6Q3SY56 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.38□□□□□ -0.11
SP6Q3SY56 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SP6Q3SY56 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 AC026691.1-201ENST00000602502 2017 ntBASIC14.38□□□□□ -0.11
SP6Q3SY56 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.38□□□□□ -0.11
SP6Q3SY56 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.38□□□□□ -0.11
SP6Q3SY56 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.38□□□□□ -0.11
SP6Q3SY56 TSPY14P-201ENST00000303979 915 ntBASIC14.38□□□□□ -0.11
SP6Q3SY56 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.38□□□□□ -0.11
SP6Q3SY56 SLC25A1P3-201ENST00000395415 828 ntBASIC14.38□□□□□ -0.11
SP6Q3SY56 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.38□□□□□ -0.11
SP6Q3SY56 AC098590.1-201ENST00000468126 897 ntBASIC14.38□□□□□ -0.11
SP6Q3SY56 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.38□□□□□ -0.11
SP6Q3SY56 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.38□□□□□ -0.11
SP6Q3SY56 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
SP6Q3SY56 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.38□□□□□ -0.11
SP6Q3SY56 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.38□□□□□ -0.11
SP6Q3SY56 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SP6Q3SY56 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.38□□□□□ -0.11
SP6Q3SY56 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SP6Q3SY56 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.38□□□□□ -0.11
SP6Q3SY56 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.38□□□□□ -0.11
SP6Q3SY56 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.38□□□□□ -0.11
SP6Q3SY56 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SP6Q3SY56 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.38□□□□□ -0.11
SP6Q3SY56 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.38□□□□□ -0.11
SP6Q3SY56 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SP6Q3SY56 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP6Q3SY56 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SP6Q3SY56 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.37□□□□□ -0.11
SP6Q3SY56 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP6Q3SY56 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP6Q3SY56 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SP6Q3SY56 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP6Q3SY56 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP6Q3SY56 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.37□□□□□ -0.11
SP6Q3SY56 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.37□□□□□ -0.11
SP6Q3SY56 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.37□□□□□ -0.11
SP6Q3SY56 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SP6Q3SY56 TSPY7P-201ENST00000431358 1114 ntBASIC14.37□□□□□ -0.11
SP6Q3SY56 TSPY20P-201ENST00000450910 630 ntBASIC14.37□□□□□ -0.11
SP6Q3SY56 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP6Q3SY56 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.37□□□□□ -0.11
SP6Q3SY56 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SP6Q3SY56 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.37□□□□□ -0.11
SP6Q3SY56 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP6Q3SY56 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.37□□□□□ -0.11
SP6Q3SY56 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.37□□□□□ -0.11
SP6Q3SY56 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SP6Q3SY56 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.37□□□□□ -0.11
SP6Q3SY56 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.37□□□□□ -0.11
SP6Q3SY56 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SP6Q3SY56 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP6Q3SY56 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP6Q3SY56 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.37□□□□□ -0.11
SP6Q3SY56 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.37□□□□□ -0.11
SP6Q3SY56 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SP6Q3SY56 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP6Q3SY56 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SP6Q3SY56 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP6Q3SY56 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP6Q3SY56 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP6Q3SY56 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SP6Q3SY56 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SP6Q3SY56 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
SP6Q3SY56 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SP6Q3SY56 AL391005.1-201ENST00000623953 2435 ntBASIC14.36□□□□□ -0.11
SP6Q3SY56 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.36□□□□□ -0.11
SP6Q3SY56 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SP6Q3SY56 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms