Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.12■□□□□ 0.01
GDNFP39905 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
GDNFP39905 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.12■□□□□ 0.01
GDNFP39905 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.12■□□□□ 0.01
GDNFP39905 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.12■□□□□ 0.01
GDNFP39905 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
GDNFP39905 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GDNFP39905 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDNFP39905 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
GDNFP39905 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GDNFP39905 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GDNFP39905 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GDNFP39905 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDNFP39905 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDNFP39905 CYP2T1P-202ENST00000641596 2535 ntBASIC15.11■□□□□ 0.01
GDNFP39905 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GDNFP39905 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.11■□□□□ 0.01
GDNFP39905 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDNFP39905 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.11■□□□□ 0.01
GDNFP39905 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
GDNFP39905 AC073508.3-201ENST00000619697 1419 ntBASIC15.11■□□□□ 0.01
GDNFP39905 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.11■□□□□ 0.01
GDNFP39905 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDNFP39905 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDNFP39905 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDNFP39905 AC092068.3-201ENST00000587894 2016 ntBASIC15.11■□□□□ 0.01
GDNFP39905 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDNFP39905 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
GDNFP39905 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
GDNFP39905 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDNFP39905 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.11■□□□□ 0.01
GDNFP39905 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.11■□□□□ 0.01
GDNFP39905 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.11■□□□□ 0.01
GDNFP39905 LIN28AP1-201ENST00000429574 405 ntBASIC15.11■□□□□ 0.01
GDNFP39905 AL137013.1-201ENST00000432946 1228 ntBASIC15.11■□□□□ 0.01
GDNFP39905 ATP5G1P1-201ENST00000448724 379 ntBASIC15.11■□□□□ 0.01
GDNFP39905 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.11■□□□□ 0.01
GDNFP39905 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.11■□□□□ 0.01
GDNFP39905 GCSHP2-201ENST00000560971 527 ntBASIC15.11■□□□□ 0.01
GDNFP39905 NEK4P2-201ENST00000580004 1012 ntBASIC15.11■□□□□ 0.01
GDNFP39905 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
GDNFP39905 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
GDNFP39905 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
GDNFP39905 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDNFP39905 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.11■□□□□ 0.01
GDNFP39905 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDNFP39905 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.11■□□□□ 0.01
GDNFP39905 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDNFP39905 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDNFP39905 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.11■□□□□ 0.01
GDNFP39905 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDNFP39905 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
GDNFP39905 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDNFP39905 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GDNFP39905 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.11■□□□□ 0.01
GDNFP39905 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
GDNFP39905 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.1■□□□□ 0.01
GDNFP39905 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
GDNFP39905 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.1■□□□□ 0.01
GDNFP39905 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
GDNFP39905 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.1■□□□□ 0.01
GDNFP39905 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.1■□□□□ 0.01
GDNFP39905 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
GDNFP39905 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
GDNFP39905 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.1■□□□□ 0.01
GDNFP39905 RNF216P1-203ENST00000404404 2427 ntBASIC15.1■□□□□ 0.01
GDNFP39905 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GDNFP39905 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.1■□□□□ 0.01
GDNFP39905 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GDNFP39905 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms