Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 MYCLP1-201ENST00000372451 1075 ntBASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 RASA4DP-201ENST00000460726 1199 ntBASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 AC008550.1-201ENST00000511500 884 ntBASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 AC007326.2-201ENST00000624224 7579 ntBASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.09□□□□□ -0.47
UBE2D4Q9Y2X8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
UBE2D4Q9Y2X8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
UBE2D4Q9Y2X8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
UBE2D4Q9Y2X8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.08□□□□□ -0.47
UBE2D4Q9Y2X8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC12.08□□□□□ -0.47
UBE2D4Q9Y2X8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 PKD1P5-201ENST00000532415 10291 ntBASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 AC006449.5-201ENST00000610658 2098 ntBASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 MTCL1P1-201ENST00000446207 792 ntBASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 AC079602.3-201ENST00000623931 403 ntBASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 KRT8P9-201ENST00000558927 1449 ntBASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 AC092068.3-201ENST00000587894 2016 ntBASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
UBE2D4Q9Y2X8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms