Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMCC3Q9ULS5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMCC3Q9ULS5 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMCC3Q9ULS5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMCC3Q9ULS5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TMCC3Q9ULS5 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMCC3Q9ULS5 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMCC3Q9ULS5 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
TMCC3Q9ULS5 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 TSPY15P-201ENST00000457163 923 ntBASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 AC105020.1-201ENST00000435356 2205 ntBASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 LINC02012-201ENST00000608206 1725 ntBASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMCC3Q9ULS5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 FAM8A6P-201ENST00000407496 1135 ntBASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 KRT18P22-201ENST00000402024 1347 ntBASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 LINC01568-207ENST00000641790 1380 ntBASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 UBALD1-205ENST00000590891 2641 ntBASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMCC3Q9ULS5 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.09■□□□□ 0.17
TMCC3Q9ULS5 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.09■□□□□ 0.17
TMCC3Q9ULS5 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMCC3Q9ULS5 AC005915.1-201ENST00000624912 2018 ntBASIC16.09■□□□□ 0.17
TMCC3Q9ULS5 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMCC3Q9ULS5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMCC3Q9ULS5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMCC3Q9ULS5 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms