Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RB1P06400 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RB1P06400 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.2■□□□□ 0.5
RB1P06400 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RB1P06400 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RB1P06400 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RB1P06400 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.2■□□□□ 0.5
RB1P06400 TREML5P-201ENST00000421694 576 ntBASIC18.2■□□□□ 0.5
RB1P06400 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.2■□□□□ 0.5
RB1P06400 UGT1A2P-201ENST00000454886 866 ntBASIC18.2■□□□□ 0.5
RB1P06400 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.2■□□□□ 0.5
RB1P06400 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.2■□□□□ 0.5
RB1P06400 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.2■□□□□ 0.5
RB1P06400 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RB1P06400 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.2■□□□□ 0.5
RB1P06400 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.2■□□□□ 0.5
RB1P06400 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.2■□□□□ 0.5
RB1P06400 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.2■□□□□ 0.5
RB1P06400 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.2■□□□□ 0.5
RB1P06400 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.2■□□□□ 0.5
RB1P06400 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.2■□□□□ 0.5
RB1P06400 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RB1P06400 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RB1P06400 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RB1P06400 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RB1P06400 AC008677.1-201ENST00000519230 1561 ntBASIC18.2■□□□□ 0.5
RB1P06400 AP000997.3-201ENST00000623333 2250 ntBASIC18.2■□□□□ 0.5
RB1P06400 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RB1P06400 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RB1P06400 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RB1P06400 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.2■□□□□ 0.5
RB1P06400 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.19■□□□□ 0.5
RB1P06400 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.19■□□□□ 0.5
RB1P06400 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RB1P06400 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RB1P06400 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RB1P06400 UXT-AS1-201ENST00000590504 1525 ntBASIC18.19■□□□□ 0.5
RB1P06400 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.19■□□□□ 0.5
RB1P06400 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RB1P06400 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RB1P06400 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RB1P06400 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RB1P06400 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.19■□□□□ 0.5
RB1P06400 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RB1P06400 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RB1P06400 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.19■□□□□ 0.5
RB1P06400 SPDYE14P-201ENST00000442619 822 ntBASIC18.19■□□□□ 0.5
RB1P06400 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.19■□□□□ 0.5
RB1P06400 IGHV3-42-201ENST00000520410 361 ntBASIC18.19■□□□□ 0.5
RB1P06400 AC109635.5-201ENST00000533593 962 ntBASIC18.19■□□□□ 0.5
RB1P06400 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.19■□□□□ 0.5
RB1P06400 AL009183.1-201ENST00000603760 355 ntBASIC18.19■□□□□ 0.5
RB1P06400 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
RB1P06400 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RB1P06400 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RB1P06400 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.19■□□□□ 0.5
RB1P06400 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RB1P06400 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.19■□□□□ 0.5
RB1P06400 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RB1P06400 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.18■□□□□ 0.5
RB1P06400 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RB1P06400 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RB1P06400 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RB1P06400 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.18■□□□□ 0.5
RB1P06400 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RB1P06400 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RB1P06400 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RB1P06400 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.18■□□□□ 0.5
RB1P06400 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RB1P06400 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RB1P06400 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RB1P06400 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.18■□□□□ 0.5
RB1P06400 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RB1P06400 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RB1P06400 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.18■□□□□ 0.5
RB1P06400 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RB1P06400 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.18■□□□□ 0.5
RB1P06400 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RB1P06400 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.18■□□□□ 0.5
RB1P06400 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RB1P06400 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RB1P06400 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.18■□□□□ 0.5
RB1P06400 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RB1P06400 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RB1P06400 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.18■□□□□ 0.5
RB1P06400 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RB1P06400 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RB1P06400 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RB1P06400 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RB1P06400 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.18■□□□□ 0.5
RB1P06400 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RB1P06400 REXO1L9P-201ENST00000604264 2108 ntBASIC18.17■□□□□ 0.5
RB1P06400 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RB1P06400 AL138781.2-201ENST00000617896 1843 ntBASIC18.17■□□□□ 0.5
RB1P06400 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RB1P06400 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.17■□□□□ 0.5
RB1P06400 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RB1P06400 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RB1P06400 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RB1P06400 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms