Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 AC019069.1-201ENST00000610008 1333 ntBASIC13.92□□□□□ -0.18
APOC3P02656 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
APOC3P02656 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.92□□□□□ -0.18
APOC3P02656 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
APOC3P02656 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
APOC3P02656 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.92□□□□□ -0.18
APOC3P02656 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
APOC3P02656 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 KRT18P41-201ENST00000518924 1277 ntBASIC13.92□□□□□ -0.18
APOC3P02656 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC13.92□□□□□ -0.18
APOC3P02656 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
APOC3P02656 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.92□□□□□ -0.18
APOC3P02656 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
APOC3P02656 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.92□□□□□ -0.18
APOC3P02656 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
APOC3P02656 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.92□□□□□ -0.18
APOC3P02656 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
APOC3P02656 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
APOC3P02656 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.92□□□□□ -0.18
APOC3P02656 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.92□□□□□ -0.18
APOC3P02656 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.92□□□□□ -0.18
APOC3P02656 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.92□□□□□ -0.18
APOC3P02656 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.91□□□□□ -0.18
APOC3P02656 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
APOC3P02656 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOC3P02656 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC3P02656 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
APOC3P02656 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC3P02656 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC3P02656 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.91□□□□□ -0.18
APOC3P02656 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
APOC3P02656 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOC3P02656 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC3P02656 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC3P02656 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC3P02656 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
APOC3P02656 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC13.91□□□□□ -0.18
APOC3P02656 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC3P02656 UNC93B8-201ENST00000511903 705 ntBASIC13.91□□□□□ -0.18
APOC3P02656 AL591742.1-201ENST00000604433 565 ntBASIC13.91□□□□□ -0.18
APOC3P02656 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.91□□□□□ -0.18
APOC3P02656 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.91□□□□□ -0.18
APOC3P02656 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.91□□□□□ -0.18
APOC3P02656 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC3P02656 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC3P02656 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
APOC3P02656 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC3P02656 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC3P02656 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC3P02656 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOC3P02656 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.91□□□□□ -0.18
APOC3P02656 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
APOC3P02656 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.91□□□□□ -0.18
APOC3P02656 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
APOC3P02656 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
APOC3P02656 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.91□□□□□ -0.18
APOC3P02656 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC3P02656 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC13.9□□□□□ -0.18
APOC3P02656 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.9□□□□□ -0.18
APOC3P02656 AP006587.1-201ENST00000534129 1502 ntBASIC13.9□□□□□ -0.18
APOC3P02656 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.9□□□□□ -0.18
APOC3P02656 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
APOC3P02656 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.9□□□□□ -0.18
APOC3P02656 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
APOC3P02656 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC13.9□□□□□ -0.18
APOC3P02656 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 AC008764.7-201ENST00000593779 1081 ntBASIC13.9□□□□□ -0.18
APOC3P02656 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
APOC3P02656 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC3P02656 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC13.9□□□□□ -0.18
APOC3P02656 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms