Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ZIC3O60481 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZIC3O60481 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.57■□□□□ 0.08
ZIC3O60481 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZIC3O60481 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.56■□□□□ 0.08
ZIC3O60481 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.56■□□□□ 0.08
ZIC3O60481 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.56■□□□□ 0.08
ZIC3O60481 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.56■□□□□ 0.08
ZIC3O60481 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZIC3O60481 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.56■□□□□ 0.08
ZIC3O60481 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.56■□□□□ 0.08
ZIC3O60481 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZIC3O60481 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
ZIC3O60481 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZIC3O60481 MIR574-201ENST00000385209 96 ntBASIC15.56■□□□□ 0.08
ZIC3O60481 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ZIC3O60481 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
ZIC3O60481 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.56■□□□□ 0.08
ZIC3O60481 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.56■□□□□ 0.08
ZIC3O60481 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.56■□□□□ 0.08
ZIC3O60481 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.56■□□□□ 0.08
ZIC3O60481 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
ZIC3O60481 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
ZIC3O60481 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZIC3O60481 ZNF259P1-201ENST00000407656 1365 ntBASIC15.56■□□□□ 0.08
ZIC3O60481 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZIC3O60481 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZIC3O60481 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZIC3O60481 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ZIC3O60481 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.56■□□□□ 0.08
ZIC3O60481 AC141586.5-201ENST00000624546 2050 ntBASIC15.56■□□□□ 0.08
ZIC3O60481 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZIC3O60481 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZIC3O60481 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZIC3O60481 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ZIC3O60481 HTR7P1-202ENST00000624664 4411 ntBASIC15.56■□□□□ 0.08
ZIC3O60481 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
ZIC3O60481 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZIC3O60481 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZIC3O60481 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ZIC3O60481 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.55■□□□□ 0.08
ZIC3O60481 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
ZIC3O60481 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
ZIC3O60481 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZIC3O60481 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
ZIC3O60481 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
ZIC3O60481 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZIC3O60481 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZIC3O60481 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.55■□□□□ 0.08
ZIC3O60481 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
ZIC3O60481 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZIC3O60481 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZIC3O60481 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.55■□□□□ 0.08
ZIC3O60481 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZIC3O60481 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZIC3O60481 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.55■□□□□ 0.08
ZIC3O60481 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZIC3O60481 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.55■□□□□ 0.08
ZIC3O60481 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.55■□□□□ 0.08
ZIC3O60481 AC108751.1-201ENST00000490852 363 ntBASIC15.55■□□□□ 0.08
ZIC3O60481 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.55■□□□□ 0.08
ZIC3O60481 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZIC3O60481 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.55■□□□□ 0.08
ZIC3O60481 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ZIC3O60481 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.55■□□□□ 0.08
ZIC3O60481 AL671883.3-201ENST00000603274 991 ntBASIC15.55■□□□□ 0.08
ZIC3O60481 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.55■□□□□ 0.08
ZIC3O60481 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
ZIC3O60481 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZIC3O60481 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.55■□□□□ 0.08
ZIC3O60481 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.55■□□□□ 0.08
ZIC3O60481 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZIC3O60481 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ZIC3O60481 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZIC3O60481 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZIC3O60481 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZIC3O60481 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZIC3O60481 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ZIC3O60481 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.54■□□□□ 0.08
ZIC3O60481 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.54■□□□□ 0.08
ZIC3O60481 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZIC3O60481 PI4KAP1-204ENST00000612579 1703 ntBASIC15.54■□□□□ 0.08
ZIC3O60481 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
ZIC3O60481 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZIC3O60481 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZIC3O60481 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
ZIC3O60481 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZIC3O60481 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZIC3O60481 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZIC3O60481 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZIC3O60481 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZIC3O60481 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZIC3O60481 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZIC3O60481 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZIC3O60481 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.54■□□□□ 0.08
ZIC3O60481 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
ZIC3O60481 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.54■□□□□ 0.08
ZIC3O60481 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.54■□□□□ 0.08
ZIC3O60481 PAWRP1-201ENST00000451083 565 ntBASIC15.54■□□□□ 0.08
ZIC3O60481 AC108073.2-201ENST00000464002 357 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms