Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
UPF2Q9HAU5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.33■■□□□ 1.01
UPF2Q9HAU5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UPF2Q9HAU5 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UPF2Q9HAU5 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
UPF2Q9HAU5 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
UPF2Q9HAU5 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
UPF2Q9HAU5 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
UPF2Q9HAU5 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
UPF2Q9HAU5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
UPF2Q9HAU5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
UPF2Q9HAU5 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
UPF2Q9HAU5 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC21.33■■□□□ 1
UPF2Q9HAU5 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
UPF2Q9HAU5 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
UPF2Q9HAU5 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC21.32■■□□□ 1
UPF2Q9HAU5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UPF2Q9HAU5 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.32■■□□□ 1
UPF2Q9HAU5 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
UPF2Q9HAU5 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC21.32■■□□□ 1
UPF2Q9HAU5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.32■■□□□ 1
UPF2Q9HAU5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
UPF2Q9HAU5 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.32■■□□□ 1
UPF2Q9HAU5 HMGA1P5-201ENST00000412453 271 ntBASIC21.32■■□□□ 1
UPF2Q9HAU5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
UPF2Q9HAU5 TSPY7P-201ENST00000431358 1114 ntBASIC21.32■■□□□ 1
UPF2Q9HAU5 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.32■■□□□ 1
UPF2Q9HAU5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.32■■□□□ 1
UPF2Q9HAU5 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.32■■□□□ 1
UPF2Q9HAU5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.32■■□□□ 1
UPF2Q9HAU5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.32■■□□□ 1
UPF2Q9HAU5 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
UPF2Q9HAU5 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.32■■□□□ 1
UPF2Q9HAU5 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
UPF2Q9HAU5 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC21.32■■□□□ 1
UPF2Q9HAU5 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.32■■□□□ 1
UPF2Q9HAU5 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC21.32■■□□□ 1
UPF2Q9HAU5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC21.32■■□□□ 1
UPF2Q9HAU5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UPF2Q9HAU5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
UPF2Q9HAU5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC21.31■■□□□ 1
UPF2Q9HAU5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UPF2Q9HAU5 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
UPF2Q9HAU5 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UPF2Q9HAU5 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
UPF2Q9HAU5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UPF2Q9HAU5 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UPF2Q9HAU5 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC21.31■■□□□ 1
UPF2Q9HAU5 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UPF2Q9HAU5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UPF2Q9HAU5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.31■■□□□ 1
UPF2Q9HAU5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
UPF2Q9HAU5 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.31■■□□□ 1
UPF2Q9HAU5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.31■■□□□ 1
UPF2Q9HAU5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.31■■□□□ 1
UPF2Q9HAU5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.31■■□□□ 1
UPF2Q9HAU5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.31■■□□□ 1
UPF2Q9HAU5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.31■■□□□ 1
UPF2Q9HAU5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.31■■□□□ 1
UPF2Q9HAU5 AC063926.3-201ENST00000624734 5658 ntBASIC21.31■■□□□ 1
UPF2Q9HAU5 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UPF2Q9HAU5 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC21.31■■□□□ 1
UPF2Q9HAU5 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
UPF2Q9HAU5 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UPF2Q9HAU5 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
UPF2Q9HAU5 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UPF2Q9HAU5 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UPF2Q9HAU5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
UPF2Q9HAU5 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UPF2Q9HAU5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
UPF2Q9HAU5 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
UPF2Q9HAU5 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC21.3■■□□□ 1
UPF2Q9HAU5 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC21.3■■□□□ 1
UPF2Q9HAU5 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UPF2Q9HAU5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.3■■□□□ 1
UPF2Q9HAU5 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
UPF2Q9HAU5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC21.3■■□□□ 1
UPF2Q9HAU5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.3■■□□□ 1
UPF2Q9HAU5 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC21.3■■□□□ 1
UPF2Q9HAU5 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UPF2Q9HAU5 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC21.3■■□□□ 1
UPF2Q9HAU5 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
UPF2Q9HAU5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC21.3■■□□□ 1
UPF2Q9HAU5 AC046158.3-201ENST00000624947 2558 ntBASIC21.3■■□□□ 1
UPF2Q9HAU5 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UPF2Q9HAU5 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
UPF2Q9HAU5 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
UPF2Q9HAU5 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
UPF2Q9HAU5 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UPF2Q9HAU5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UPF2Q9HAU5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.3■■□□□ 1
UPF2Q9HAU5 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.3■■□□□ 1
UPF2Q9HAU5 AC002558.1-201ENST00000488906 803 ntBASIC21.3■■□□□ 1
UPF2Q9HAU5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.3■■□□□ 1
UPF2Q9HAU5 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.3■■□□□ 1
UPF2Q9HAU5 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.3■■□□□ 1
UPF2Q9HAU5 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.3■■□□□ 1
UPF2Q9HAU5 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC21.3■■□□□ 1
UPF2Q9HAU5 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC21.3■■□□□ 1
UPF2Q9HAU5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms