Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 FAM8A6P-201ENST00000407496 1135 ntBASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 AL596275.1-201ENST00000423464 877 ntBASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 AC093827.2-201ENST00000512654 315 ntBASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 AC140113.3-201ENST00000605663 199 ntBASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 LINC02012-201ENST00000608206 1725 ntBASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COMMD4Q9H0A8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 AC105020.1-201ENST00000435356 2205 ntBASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 KRT18P22-201ENST00000402024 1347 ntBASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 LINC01568-207ENST00000641790 1380 ntBASIC15.35■□□□□ 0.05
COMMD4Q9H0A8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 AC093525.9-201ENST00000624961 1746 ntBASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 AC005915.1-201ENST00000624912 2018 ntBASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 MYCLP1-201ENST00000372451 1075 ntBASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
COMMD4Q9H0A8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms