Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 AC098934.4-201ENST00000564127 592 ntBASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 MTDHP1-201ENST00000605323 784 ntBASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 AL023875.1-201ENST00000640777 796 ntBASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 LYSMD4-203ENST00000378904 2122 ntBASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 AC092364.2-201ENST00000596710 2692 ntBASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.24□□□□□ -0.13
SMIM3Q9BZL3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 AC022188.1-201ENST00000620960 1664 ntBASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 GUSBP6-202ENST00000438529 1198 ntBASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 AC006970.2-201ENST00000450065 779 ntBASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM3Q9BZL3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 AC239809.2-201ENST00000415381 517 ntBASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.22□□□□□ -0.13
SMIM3Q9BZL3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms