Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 LYSMD4-203ENST00000378904 2122 ntBASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 AC015922.1-201ENST00000421102 1152 ntBASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 IGHV3-62-201ENST00000520057 340 ntBASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 RN7SL204P-201ENST00000582831 262 ntBASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 TNXA-203ENST00000507684 2038 ntBASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC21.03■□□□□ 0.96
CRAMP1Q96RY5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 MIR661-201ENST00000384842 89 ntBASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 AC236430.1-201ENST00000402231 743 ntBASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 CENPM-205ENST00000404067 905 ntTSL 3 BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 SPDYE14P-201ENST00000442619 822 ntBASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 AC002472.2-201ENST00000442739 958 ntBASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 TSPY16P-201ENST00000449843 468 ntBASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.02■□□□□ 0.96
CRAMP1Q96RY5 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CRAMP1Q96RY5 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CRAMP1Q96RY5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CRAMP1Q96RY5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.02■□□□□ 0.95
CRAMP1Q96RY5 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CRAMP1Q96RY5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CRAMP1Q96RY5 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CRAMP1Q96RY5 AC008677.1-201ENST00000519230 1561 ntBASIC21.02■□□□□ 0.95
CRAMP1Q96RY5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CRAMP1Q96RY5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 OARD1-208ENST00000469104 704 ntTSL 2 BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 AC125807.1-201ENST00000483097 614 ntBASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 BAD-207ENST00000544785 525 ntTSL 3 BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 AC098818.2-201ENST00000564925 2320 ntBASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CRAMP1Q96RY5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CRAMP1Q96RY5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21■□□□□ 0.95
CRAMP1Q96RY5 FO538757.1-201ENST00000623083 1397 ntBASIC21■□□□□ 0.95
CRAMP1Q96RY5 UXT-AS1-201ENST00000590504 1525 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms