Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 AC092171.3-201ENST00000610122 2651 ntBASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 DUTP2-201ENST00000519164 463 ntBASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 CKBP1-201ENST00000565489 1086 ntBASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 AC138035.3-201ENST00000622706 2791 ntBASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 AC078925.2-201ENST00000624013 1973 ntBASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.76■□□□□ 0.11
CROCCP3Q8IVE0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 AC104581.4-201ENST00000623126 3052 ntBASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 POM121L13P-201ENST00000422362 380 ntBASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.75■□□□□ 0.11
CROCCP3Q8IVE0 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 MCCD1P1-208ENST00000445732 328 ntBASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.74■□□□□ 0.11
CROCCP3Q8IVE0 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms