Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 AP000842.3-202ENST00000569238 1080 ntBASIC19.69■□□□□ 0.74
PTPRFP10586 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.69■□□□□ 0.74
PTPRFP10586 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PTPRFP10586 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.69■□□□□ 0.74
PTPRFP10586 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPRFP10586 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPRFP10586 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPRFP10586 FO538757.1-201ENST00000623083 1397 ntBASIC19.69■□□□□ 0.74
PTPRFP10586 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.69■□□□□ 0.74
PTPRFP10586 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.69■□□□□ 0.74
PTPRFP10586 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPRFP10586 AL353732.1-201ENST00000569618 1459 ntBASIC19.69■□□□□ 0.74
PTPRFP10586 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPRFP10586 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPRFP10586 AC012569.1-201ENST00000591191 1524 ntBASIC19.69■□□□□ 0.74
PTPRFP10586 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPRFP10586 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PTPRFP10586 AC015922.1-201ENST00000421102 1152 ntBASIC19.68■□□□□ 0.74
PTPRFP10586 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.68■□□□□ 0.74
PTPRFP10586 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.68■□□□□ 0.74
PTPRFP10586 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.68■□□□□ 0.74
PTPRFP10586 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.68■□□□□ 0.74
PTPRFP10586 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPRFP10586 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPRFP10586 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPRFP10586 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPRFP10586 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPRFP10586 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPRFP10586 FOXO1B-201ENST00000504678 1527 ntBASIC19.68■□□□□ 0.74
PTPRFP10586 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPRFP10586 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.68■□□□□ 0.74
PTPRFP10586 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPRFP10586 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPRFP10586 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PTPRFP10586 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPRFP10586 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPRFP10586 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPRFP10586 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPRFP10586 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.68■□□□□ 0.74
PTPRFP10586 HCG4-201ENST00000418983 998 ntBASIC19.68■□□□□ 0.74
PTPRFP10586 SPDYE7P-202ENST00000420373 878 ntBASIC19.68■□□□□ 0.74
PTPRFP10586 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPRFP10586 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPRFP10586 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPRFP10586 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.68■□□□□ 0.74
PTPRFP10586 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPRFP10586 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.68■□□□□ 0.74
PTPRFP10586 AC005225.4-201ENST00000557330 545 ntBASIC19.68■□□□□ 0.74
PTPRFP10586 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPRFP10586 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPRFP10586 AC012645.4-201ENST00000610691 1061 ntBASIC19.68■□□□□ 0.74
PTPRFP10586 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PTPRFP10586 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PTPRFP10586 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPRFP10586 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPRFP10586 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPRFP10586 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPRFP10586 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTPRFP10586 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPRFP10586 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPRFP10586 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
PTPRFP10586 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPRFP10586 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPRFP10586 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPRFP10586 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPRFP10586 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPRFP10586 AC004890.2-204ENST00000481968 304 ntBASIC19.67■□□□□ 0.74
PTPRFP10586 ALG1L8P-201ENST00000533887 760 ntBASIC19.67■□□□□ 0.74
PTPRFP10586 LINC01225-203ENST00000563550 1244 ntBASIC19.67■□□□□ 0.74
PTPRFP10586 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.67■□□□□ 0.74
PTPRFP10586 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPRFP10586 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTPRFP10586 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPRFP10586 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPRFP10586 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPRFP10586 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPRFP10586 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.67■□□□□ 0.74
PTPRFP10586 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTPRFP10586 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.66■□□□□ 0.74
PTPRFP10586 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.66■□□□□ 0.74
PTPRFP10586 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.66■□□□□ 0.74
PTPRFP10586 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTPRFP10586 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.66■□□□□ 0.74
PTPRFP10586 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPRFP10586 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTPRFP10586 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPRFP10586 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PTPRFP10586 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.66■□□□□ 0.74
PTPRFP10586 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.66■□□□□ 0.74
PTPRFP10586 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PTPRFP10586 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.66■□□□□ 0.74
PTPRFP10586 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.66■□□□□ 0.74
PTPRFP10586 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PTPRFP10586 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.66■□□□□ 0.74
PTPRFP10586 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPRFP10586 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.66■□□□□ 0.74
PTPRFP10586 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPRFP10586 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPRFP10586 TSSK5P-201ENST00000423978 907 ntBASIC19.66■□□□□ 0.74
PTPRFP10586 SPCS2P4-201ENST00000436160 681 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms