Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 SLC25A1P3-201ENST00000395415 828 ntBASIC14.86□□□□□ -0.03
TMEM235A6NFC5 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 GCSHP5-201ENST00000443090 522 ntBASIC14.86□□□□□ -0.03
TMEM235A6NFC5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 AC112698.1-201ENST00000510299 916 ntBASIC14.86□□□□□ -0.03
TMEM235A6NFC5 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 EGLN1P1-201ENST00000531623 762 ntBASIC14.86□□□□□ -0.03
TMEM235A6NFC5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 AC024563.2-201ENST00000603282 481 ntBASIC14.86□□□□□ -0.03
TMEM235A6NFC5 Z99916.2-201ENST00000604037 246 ntBASIC14.86□□□□□ -0.03
TMEM235A6NFC5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM235A6NFC5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 KRT89P-201ENST00000620027 1478 ntBASIC14.85□□□□□ -0.03
TMEM235A6NFC5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 TSPY20P-201ENST00000450910 630 ntBASIC14.85□□□□□ -0.03
TMEM235A6NFC5 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 AC128688.1-201ENST00000487626 519 ntBASIC14.85□□□□□ -0.03
TMEM235A6NFC5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 AC009154.2-201ENST00000621177 724 ntBASIC14.85□□□□□ -0.03
TMEM235A6NFC5 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 PCDHA1-201ENST00000378133 2726 ntBASIC14.85□□□□□ -0.03
TMEM235A6NFC5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEM235A6NFC5 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM235A6NFC5 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TMEM235A6NFC5 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM235A6NFC5 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.84□□□□□ -0.03
TMEM235A6NFC5 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM235A6NFC5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM235A6NFC5 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM235A6NFC5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM235A6NFC5 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.84□□□□□ -0.03
TMEM235A6NFC5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TMEM235A6NFC5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM235A6NFC5 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM235A6NFC5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
TMEM235A6NFC5 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM235A6NFC5 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms