Protein–RNA interactions for Protein: Q9UQQ2

SH2B3, SH2B adapter protein 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3Q9UQQ2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 AC079776.2-201ENST00000641154 1609 ntBASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 FGFR3P6-201ENST00000457012 610 ntBASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 EMBP1-201ENST00000458200 901 ntBASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 MTDHP3-201ENST00000594186 672 ntBASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 AC008608.2-201ENST00000606089 416 ntBASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 AC116353.5-201ENST00000638148 1699 ntBASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SH2B3Q9UQQ2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 AL355877.3-201ENST00000622820 899 ntBASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 AC073592.4-201ENST00000623827 446 ntBASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
SH2B3Q9UQQ2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SH2B3Q9UQQ2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SH2B3Q9UQQ2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SH2B3Q9UQQ2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SH2B3Q9UQQ2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SH2B3Q9UQQ2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SH2B3Q9UQQ2 OR6D1P-202ENST00000641007 5290 ntBASIC16.77■□□□□ 0.27
SH2B3Q9UQQ2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SH2B3Q9UQQ2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SH2B3Q9UQQ2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SH2B3Q9UQQ2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SH2B3Q9UQQ2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.77■□□□□ 0.27
SH2B3Q9UQQ2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SH2B3Q9UQQ2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SH2B3Q9UQQ2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 AL020989.1-201ENST00000422979 469 ntBASIC16.76■□□□□ 0.27
SH2B3Q9UQQ2 SAPCD2P3-201ENST00000455031 850 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms