Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 AP001412.1-201ENST00000608405 714 ntBASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.51■□□□□ 0.07
NANOGP1Q8N7R0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 AC026471.5-201ENST00000615068 467 ntBASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 AC103702.1-201ENST00000548801 2630 ntBASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 AC132872.4-202ENST00000622924 2756 ntBASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.5■□□□□ 0.07
NANOGP1Q8N7R0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 AC105917.1-201ENST00000506637 2539 ntBASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 UNC93B2-201ENST00000285383 730 ntBASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NANOGP1Q8N7R0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms