Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA2D1P54289 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CACNA2D1P54289 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.43■□□□□ 0.54
CACNA2D1P54289 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA2D1P54289 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA2D1P54289 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA2D1P54289 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA2D1P54289 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.43■□□□□ 0.54
CACNA2D1P54289 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.43■□□□□ 0.54
CACNA2D1P54289 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA2D1P54289 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.43■□□□□ 0.54
CACNA2D1P54289 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.43■□□□□ 0.54
CACNA2D1P54289 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.43■□□□□ 0.54
CACNA2D1P54289 AC008735.5-201ENST00000623544 497 ntBASIC18.43■□□□□ 0.54
CACNA2D1P54289 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.43■□□□□ 0.54
CACNA2D1P54289 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
CACNA2D1P54289 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA2D1P54289 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.43■□□□□ 0.54
CACNA2D1P54289 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.43■□□□□ 0.54
CACNA2D1P54289 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.43■□□□□ 0.54
CACNA2D1P54289 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA2D1P54289 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA2D1P54289 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA2D1P54289 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CACNA2D1P54289 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CACNA2D1P54289 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.43■□□□□ 0.54
CACNA2D1P54289 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA2D1P54289 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA2D1P54289 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.43■□□□□ 0.54
CACNA2D1P54289 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA2D1P54289 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.42■□□□□ 0.54
CACNA2D1P54289 AC124067.4-201ENST00000519691 2379 ntBASIC18.42■□□□□ 0.54
CACNA2D1P54289 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA2D1P54289 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.42■□□□□ 0.54
CACNA2D1P54289 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CACNA2D1P54289 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.42■□□□□ 0.54
CACNA2D1P54289 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
CACNA2D1P54289 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA2D1P54289 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.42■□□□□ 0.54
CACNA2D1P54289 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA2D1P54289 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA2D1P54289 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CACNA2D1P54289 AC092910.1-201ENST00000482027 1129 ntBASIC18.42■□□□□ 0.54
CACNA2D1P54289 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.42■□□□□ 0.54
CACNA2D1P54289 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.42■□□□□ 0.54
CACNA2D1P54289 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.42■□□□□ 0.54
CACNA2D1P54289 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.42■□□□□ 0.54
CACNA2D1P54289 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.42■□□□□ 0.54
CACNA2D1P54289 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.42■□□□□ 0.54
CACNA2D1P54289 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA2D1P54289 AL671883.3-201ENST00000603274 991 ntBASIC18.42■□□□□ 0.54
CACNA2D1P54289 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.42■□□□□ 0.54
CACNA2D1P54289 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.42■□□□□ 0.54
CACNA2D1P54289 LINC01451-201ENST00000623792 534 ntBASIC18.42■□□□□ 0.54
CACNA2D1P54289 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
CACNA2D1P54289 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA2D1P54289 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.42■□□□□ 0.54
CACNA2D1P54289 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA2D1P54289 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.42■□□□□ 0.54
CACNA2D1P54289 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA2D1P54289 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA2D1P54289 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CACNA2D1P54289 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.41■□□□□ 0.54
CACNA2D1P54289 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CACNA2D1P54289 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA2D1P54289 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA2D1P54289 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA2D1P54289 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNA2D1P54289 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNA2D1P54289 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.41■□□□□ 0.54
CACNA2D1P54289 LAGE3P1-201ENST00000425356 484 ntBASIC18.41■□□□□ 0.54
CACNA2D1P54289 KRT18P27-201ENST00000427733 1299 ntBASIC18.41■□□□□ 0.54
CACNA2D1P54289 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.41■□□□□ 0.54
CACNA2D1P54289 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.41■□□□□ 0.54
CACNA2D1P54289 IGHV3-22-201ENST00000520721 359 ntBASIC18.41■□□□□ 0.54
CACNA2D1P54289 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNA2D1P54289 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.41■□□□□ 0.54
CACNA2D1P54289 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CACNA2D1P54289 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
CACNA2D1P54289 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.41■□□□□ 0.54
CACNA2D1P54289 HLA-J-201ENST00000462773 1622 ntBASIC18.41■□□□□ 0.54
CACNA2D1P54289 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA2D1P54289 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.41■□□□□ 0.54
CACNA2D1P54289 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
CACNA2D1P54289 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.41■□□□□ 0.54
CACNA2D1P54289 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CACNA2D1P54289 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNA2D1P54289 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CACNA2D1P54289 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CACNA2D1P54289 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D1P54289 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNA2D1P54289 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D1P54289 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D1P54289 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CACNA2D1P54289 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D1P54289 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CACNA2D1P54289 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNA2D1P54289 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D1P54289 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D1P54289 AC073621.1-201ENST00000392730 636 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms