Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTDNEP1O95476 FLJ38576-201ENST00000623820 2459 ntBASIC20.1■□□□□ 0.81
CTDNEP1O95476 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CTDNEP1O95476 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CTDNEP1O95476 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTDNEP1O95476 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.1■□□□□ 0.81
CTDNEP1O95476 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.1■□□□□ 0.81
CTDNEP1O95476 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.1■□□□□ 0.81
CTDNEP1O95476 AC106795.1-205ENST00000512851 1056 ntBASIC20.1■□□□□ 0.81
CTDNEP1O95476 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CTDNEP1O95476 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CTDNEP1O95476 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CTDNEP1O95476 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.1■□□□□ 0.81
CTDNEP1O95476 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTDNEP1O95476 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.1■□□□□ 0.81
CTDNEP1O95476 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CTDNEP1O95476 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTDNEP1O95476 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CTDNEP1O95476 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTDNEP1O95476 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.09■□□□□ 0.81
CTDNEP1O95476 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTDNEP1O95476 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CTDNEP1O95476 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CTDNEP1O95476 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTDNEP1O95476 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.09■□□□□ 0.81
CTDNEP1O95476 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTDNEP1O95476 TSPY19P-201ENST00000418461 509 ntBASIC20.09■□□□□ 0.81
CTDNEP1O95476 TSPY18P-201ENST00000441642 509 ntBASIC20.09■□□□□ 0.81
CTDNEP1O95476 MIR3652-201ENST00000579335 131 ntBASIC20.09■□□□□ 0.81
CTDNEP1O95476 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.09■□□□□ 0.81
CTDNEP1O95476 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTDNEP1O95476 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.09■□□□□ 0.81
CTDNEP1O95476 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.09■□□□□ 0.81
CTDNEP1O95476 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTDNEP1O95476 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTDNEP1O95476 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.09■□□□□ 0.81
CTDNEP1O95476 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTDNEP1O95476 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CTDNEP1O95476 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.09■□□□□ 0.81
CTDNEP1O95476 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTDNEP1O95476 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
CTDNEP1O95476 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTDNEP1O95476 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CTDNEP1O95476 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTDNEP1O95476 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CTDNEP1O95476 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
CTDNEP1O95476 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CTDNEP1O95476 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTDNEP1O95476 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.08■□□□□ 0.81
CTDNEP1O95476 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTDNEP1O95476 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTDNEP1O95476 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.08■□□□□ 0.81
CTDNEP1O95476 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.08■□□□□ 0.81
CTDNEP1O95476 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.08■□□□□ 0.81
CTDNEP1O95476 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTDNEP1O95476 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTDNEP1O95476 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTDNEP1O95476 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTDNEP1O95476 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTDNEP1O95476 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTDNEP1O95476 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTDNEP1O95476 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
CTDNEP1O95476 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.08■□□□□ 0.81
CTDNEP1O95476 SIGLEC30P-201ENST00000455569 941 ntBASIC20.08■□□□□ 0.81
CTDNEP1O95476 KRT18P31-201ENST00000506277 1292 ntBASIC20.08■□□□□ 0.81
CTDNEP1O95476 AC124947.2-201ENST00000547118 1133 ntBASIC20.08■□□□□ 0.81
CTDNEP1O95476 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.08■□□□□ 0.81
CTDNEP1O95476 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CTDNEP1O95476 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.08■□□□□ 0.81
CTDNEP1O95476 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTDNEP1O95476 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.08■□□□□ 0.8
CTDNEP1O95476 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CTDNEP1O95476 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CTDNEP1O95476 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CTDNEP1O95476 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CTDNEP1O95476 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CTDNEP1O95476 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.08■□□□□ 0.8
CTDNEP1O95476 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTDNEP1O95476 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDNEP1O95476 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTDNEP1O95476 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTDNEP1O95476 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDNEP1O95476 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTDNEP1O95476 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDNEP1O95476 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDNEP1O95476 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDNEP1O95476 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDNEP1O95476 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.07■□□□□ 0.8
CTDNEP1O95476 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CTDNEP1O95476 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.07■□□□□ 0.8
CTDNEP1O95476 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.07■□□□□ 0.8
CTDNEP1O95476 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
CTDNEP1O95476 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
CTDNEP1O95476 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDNEP1O95476 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTDNEP1O95476 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDNEP1O95476 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTDNEP1O95476 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CTDNEP1O95476 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.07■□□□□ 0.8
CTDNEP1O95476 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms